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Cluster: AG431_bin.10_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53724 k141_53724_6 4862 5200 - 4.A.3.1.2
TF k141_53724 k141_53724_7 5414 6418 - LacI
TC k141_53724 k141_53724_8 6775 7722 + 4.A.3.1.1
TC k141_53724 k141_53724_9 7706 8548 + 4.A.3.1.1
CAZyme k141_53724 k141_53724_10 8619 10058 + GH1
TF k141_53724 k141_53724_11 10327 11364 - LacI
CAZyme k141_53724 k141_53724_12 11706 13148 + GH1
TC k141_53724 k141_53724_13 13325 15085 + 4.A.3.1.1
TF k141_53724 k141_53724_14 15262 16272 - LacI
TC k141_53724 k141_53724_15 16548 18326 + 4.A.3.1.1
CAZyme k141_53724 k141_53724_16 18402 19823 + GH1
Gene ID: k141_53724_6
Type: TC
Location: 4862 - 5200 (-)
Gene ID: k141_53724_7
Type: TF
Location: 5414 - 6418 (-)
Gene ID: k141_53724_8
Type: TC
Location: 6775 - 7722 (+)
Gene ID: k141_53724_9
Type: TC
Location: 7706 - 8548 (+)
Gene ID: k141_53724_10
Type: CAZyme
Location: 8619 - 10058 (+)
Gene ID: k141_53724_11
Type: TF
Location: 10327 - 11364 (-)
Gene ID: k141_53724_12
Type: CAZyme
Location: 11706 - 13148 (+)
Gene ID: k141_53724_13
Type: TC
Location: 13325 - 15085 (+)
Gene ID: k141_53724_14
Type: TF
Location: 15262 - 16272 (-)
Gene ID: k141_53724_15
Type: TC
Location: 16548 - 18326 (+)
Gene ID: k141_53724_16
Type: CAZyme
Location: 18402 - 19823 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_53724_11 vegetarian > omnivore 1.00965 0.02677

🧭 Explore Read Mapping of CGC

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