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Cluster: AG421_56_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_192706 k141_192706_78 88492 91056 - GH3
CAZyme k141_192706 k141_192706_79 91064 92494 - GH30_2
CAZyme k141_192706 k141_192706_80 92495 93919 - GH30_2
CAZyme k141_192706 k141_192706_81 93955 96204 - GH92
pfam k141_192706 k141_192706_82 96393 97346 - BT_3987-like_N | BT_3044-like_C
pfam k141_192706 k141_192706_83 97368 99374 - SusD_RagB | SusD-like_3
TC k141_192706 k141_192706_84 99389 102484 - 1.B.14.6.1
pfam k141_192706 k141_192706_85 102508 103836 - NHL | TIG
CAZyme k141_192706 k141_192706_86 103890 105992 - GH36
CAZyme k141_192706 k141_192706_87 106485 108707 - GH92
CAZyme k141_192706 k141_192706_88 108704 110713 - GH2
TF k141_192706 k141_192706_89 110926 114951 + HTH_AraC
CAZyme k141_192706 k141_192706_90 114948 115982 + GH43_24
Gene ID: k141_192706_78
Type: CAZyme
Location: 88492 - 91056 (-)
Gene ID: k141_192706_79
Type: CAZyme
Location: 91064 - 92494 (-)
Gene ID: k141_192706_80
Type: CAZyme
Location: 92495 - 93919 (-)
Gene ID: k141_192706_81
Type: CAZyme
Location: 93955 - 96204 (-)
Gene ID: k141_192706_82
Type: pfam
Location: 96393 - 97346 (-)
Gene ID: k141_192706_83
Type: pfam
Location: 97368 - 99374 (-)
Gene ID: k141_192706_84
Type: TC
Location: 99389 - 102484 (-)
Gene ID: k141_192706_85
Type: pfam
Location: 102508 - 103836 (-)
Gene ID: k141_192706_86
Type: CAZyme
Location: 103890 - 105992 (-)
Gene ID: k141_192706_87
Type: CAZyme
Location: 106485 - 108707 (-)
Gene ID: k141_192706_88
Type: CAZyme
Location: 108704 - 110713 (-)
Gene ID: k141_192706_89
Type: TF
Location: 110926 - 114951 (+)
Gene ID: k141_192706_90
Type: CAZyme
Location: 114948 - 115982 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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