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Cluster: AG420_maxbin.006_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13838 k141_13838_4 3530 5224 + 4.A.3.1.1
STP k141_13838 k141_13838_5 5387 5728 + DeoRC
pfam k141_13838 k141_13838_6 5766 6998 - Fic
CAZyme k141_13838 k141_13838_7 7366 8787 - GH1
TC k141_13838 k141_13838_8 8863 10641 - 4.A.3.1.1
TF k141_13838 k141_13838_9 10917 11927 + LacI
TC k141_13838 k141_13838_10 12101 13861 - 4.A.3.1.1
CAZyme k141_13838 k141_13838_11 14038 15480 - GH1
TF k141_13838 k141_13838_12 15822 16859 + LacI
CAZyme k141_13838 k141_13838_13 17127 18566 - GH1
TC k141_13838 k141_13838_14 18633 20408 - 4.A.3.1.1
TF k141_13838 k141_13838_15 20766 21770 + LacI
TC k141_13838 k141_13838_16 21985 22323 + 4.A.3.1.2
Gene ID: k141_13838_4
Type: TC
Location: 3530 - 5224 (+)
Gene ID: k141_13838_5
Type: STP
Location: 5387 - 5728 (+)
Gene ID: k141_13838_6
Type: pfam
Location: 5766 - 6998 (-)
Gene ID: k141_13838_7
Type: CAZyme
Location: 7366 - 8787 (-)
Gene ID: k141_13838_8
Type: TC
Location: 8863 - 10641 (-)
Gene ID: k141_13838_9
Type: TF
Location: 10917 - 11927 (+)
Gene ID: k141_13838_10
Type: TC
Location: 12101 - 13861 (-)
Gene ID: k141_13838_11
Type: CAZyme
Location: 14038 - 15480 (-)
Gene ID: k141_13838_12
Type: TF
Location: 15822 - 16859 (+)
Gene ID: k141_13838_13
Type: CAZyme
Location: 17127 - 18566 (-)
Gene ID: k141_13838_14
Type: TC
Location: 18633 - 20408 (-)
Gene ID: k141_13838_15
Type: TF
Location: 20766 - 21770 (+)
Gene ID: k141_13838_16
Type: TC
Location: 21985 - 22323 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_13838_12 vegetarian > omnivore 1.00383 0.02695

🧭 Explore Read Mapping of CGC

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