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Cluster: AG420_maxbin.006_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_17839 k141_17839_3 1938 2864 - CE7
TC k141_17839 k141_17839_4 2996 3823 - 3.A.1.5.27
TC k141_17839 k141_17839_5 3824 5839 - 3.A.1.5.25
TC k141_17839 k141_17839_6 5843 6799 - 3.A.1.5.38
TC k141_17839 k141_17839_7 6957 8570 - 3.A.1.5.27
pfam k141_17839 k141_17839_8 8936 10876 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_17839 k141_17839_9 10883 13186 - 2.A.66.4.4
pfam k141_17839 k141_17839_10 13190 13690 - tRNA_edit
pfam k141_17839 k141_17839_11 13824 16703 - UvrA_DNA-bind | UvrA_inter
TC k141_17839 k141_17839_12 16963 17793 + 3.A.1.132.3
Gene ID: k141_17839_3
Type: CAZyme
Location: 1938 - 2864 (-)
Gene ID: k141_17839_4
Type: TC
Location: 2996 - 3823 (-)
Gene ID: k141_17839_5
Type: TC
Location: 3824 - 5839 (-)
Gene ID: k141_17839_6
Type: TC
Location: 5843 - 6799 (-)
Gene ID: k141_17839_7
Type: TC
Location: 6957 - 8570 (-)
Gene ID: k141_17839_8
Type: pfam
Location: 8936 - 10876 (-)
Gene ID: k141_17839_9
Type: TC
Location: 10883 - 13186 (-)
Gene ID: k141_17839_10
Type: pfam
Location: 13190 - 13690 (-)
Gene ID: k141_17839_11
Type: pfam
Location: 13824 - 16703 (-)
Gene ID: k141_17839_12
Type: TC
Location: 16963 - 17793 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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