Cluster: AG420_maxbin.006_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG420_maxbin.006
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_30395 | k141_30395_8 | 16788 | 18032 | - | GT4 |
| pfam | k141_30395 | k141_30395_9 | 18046 | 18810 | - | BcrAD_BadFG |
| pfam | k141_30395 | k141_30395_10 | 18862 | 20025 | - | HGD-D |
| TC | k141_30395 | k141_30395_11 | 20103 | 20888 | - | 3.A.1.5.36 |
| TC | k141_30395 | k141_30395_12 | 20875 | 21873 | - | 3.A.1.5.35 |
| TC | k141_30395 | k141_30395_13 | 21877 | 22704 | - | 3.A.1.5.39 |
| TC | k141_30395 | k141_30395_14 | 22704 | 23657 | - | 3.A.1.5.11 |
| TC | k141_30395 | k141_30395_15 | 23744 | 25354 | - | 3.A.1.5.11 |
| pfam | k141_30395 | k141_30395_16 | 25539 | 26822 | - | HGD-D |
| TC | k141_30395 | k141_30395_17 | 27273 | 28343 | - | 3.A.1.1.3 |
| TC | k141_30395 | k141_30395_18 | 28347 | 29789 | - | 3.A.1.8.1 |
Gene ID: k141_30395_8
Type: CAZyme
Location: 16788 - 18032 (-)
Type: CAZyme
Location: 16788 - 18032 (-)
Gene ID: k141_30395_9
Type: pfam
Location: 18046 - 18810 (-)
Type: pfam
Location: 18046 - 18810 (-)
Gene ID: k141_30395_10
Type: pfam
Location: 18862 - 20025 (-)
Type: pfam
Location: 18862 - 20025 (-)
Gene ID: k141_30395_11
Type: TC
Location: 20103 - 20888 (-)
Type: TC
Location: 20103 - 20888 (-)
Gene ID: k141_30395_12
Type: TC
Location: 20875 - 21873 (-)
Type: TC
Location: 20875 - 21873 (-)
Gene ID: k141_30395_13
Type: TC
Location: 21877 - 22704 (-)
Type: TC
Location: 21877 - 22704 (-)
Gene ID: k141_30395_14
Type: TC
Location: 22704 - 23657 (-)
Type: TC
Location: 22704 - 23657 (-)
Gene ID: k141_30395_15
Type: TC
Location: 23744 - 25354 (-)
Type: TC
Location: 23744 - 25354 (-)
Gene ID: k141_30395_16
Type: pfam
Location: 25539 - 26822 (-)
Type: pfam
Location: 25539 - 26822 (-)
Gene ID: k141_30395_17
Type: TC
Location: 27273 - 28343 (-)
Type: TC
Location: 27273 - 28343 (-)
Gene ID: k141_30395_18
Type: TC
Location: 28347 - 29789 (-)
Type: TC
Location: 28347 - 29789 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_30395_11 | vegan > omnivore | 2.62227 | 0.00701 |
| k141_30395_12 | vegan > omnivore | 1.35886 | 0.00701 |
| k141_30395_13 | vegan > omnivore | 2.82661 | 0.00701 |
| k141_30395_14 | vegan > omnivore | 2.48830 | 0.00701 |
| k141_30395_15 | vegan > omnivore | 3.31844 | 0.00701 |