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Cluster: AG417_bin.22_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_244516 k141_244516_27 24046 25467 - GH1
TC k141_244516 k141_244516_28 25543 27300 - 4.A.3.1.1
TF k141_244516 k141_244516_29 27576 28586 + LacI
TC k141_244516 k141_244516_30 28769 30529 - 4.A.3.1.1
CAZyme k141_244516 k141_244516_31 30706 32148 - GH1
TF k141_244516 k141_244516_32 32490 33527 + LacI
CAZyme k141_244516 k141_244516_33 33804 35243 - GH1
TC k141_244516 k141_244516_34 35314 37089 - 4.A.3.1.1
TF k141_244516 k141_244516_35 37447 38451 + LacI
TC k141_244516 k141_244516_36 38665 39003 + 4.A.3.1.2
Gene ID: k141_244516_27
Type: CAZyme
Location: 24046 - 25467 (-)
Gene ID: k141_244516_28
Type: TC
Location: 25543 - 27300 (-)
Gene ID: k141_244516_29
Type: TF
Location: 27576 - 28586 (+)
Gene ID: k141_244516_30
Type: TC
Location: 28769 - 30529 (-)
Gene ID: k141_244516_31
Type: CAZyme
Location: 30706 - 32148 (-)
Gene ID: k141_244516_32
Type: TF
Location: 32490 - 33527 (+)
Gene ID: k141_244516_33
Type: CAZyme
Location: 33804 - 35243 (-)
Gene ID: k141_244516_34
Type: TC
Location: 35314 - 37089 (-)
Gene ID: k141_244516_35
Type: TF
Location: 37447 - 38451 (+)
Gene ID: k141_244516_36
Type: TC
Location: 38665 - 39003 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_244516_32 vegetarian > omnivore 1.05080 0.03761

🧭 Explore Read Mapping of CGC

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