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Cluster: AG417_bin.22_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_244516 k141_244516_10 9052 9495 + 4.A.6.1.16
pfam k141_244516 k141_244516_11 9495 9776 + YajC
TC k141_244516 k141_244516_12 9813 10295 + 4.A.6.1.4
TC k141_244516 k141_244516_13 10386 11186 + 4.A.6.1.4
TC k141_244516 k141_244516_14 11176 12258 + 4.A.6.1.4
TF k141_244516 k141_244516_15 12444 13175 + GntR
STP k141_244516 k141_244516_16 13290 14456 + SIS | SIS
CAZyme k141_244516 k141_244516_17 14576 15745 + CE9
Gene ID: k141_244516_10
Type: TC
Location: 9052 - 9495 (+)
Gene ID: k141_244516_11
Type: pfam
Location: 9495 - 9776 (+)
Gene ID: k141_244516_12
Type: TC
Location: 9813 - 10295 (+)
Gene ID: k141_244516_13
Type: TC
Location: 10386 - 11186 (+)
Gene ID: k141_244516_14
Type: TC
Location: 11176 - 12258 (+)
Gene ID: k141_244516_15
Type: TF
Location: 12444 - 13175 (+)
Gene ID: k141_244516_16
Type: STP
Location: 13290 - 14456 (+)
Gene ID: k141_244516_17
Type: CAZyme
Location: 14576 - 15745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_244516_11 vegan > omnivore 1.02314 0.00863

🧭 Explore Read Mapping of CGC

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