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Cluster: AG417_bin.22_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_321579 k141_321579_17 17417 18343 - CE7
TC k141_321579 k141_321579_18 18475 19302 - 3.A.1.5.27
TC k141_321579 k141_321579_19 19303 21318 - 3.A.1.5.25
TC k141_321579 k141_321579_20 21322 22278 - 3.A.1.5.38
TC k141_321579 k141_321579_21 22436 24049 - 3.A.1.5.27
pfam k141_321579 k141_321579_22 24415 26355 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_321579 k141_321579_23 26362 28665 - 2.A.66.4.4
pfam k141_321579 k141_321579_24 28669 29169 - tRNA_edit
pfam k141_321579 k141_321579_25 29303 32182 - UvrA_DNA-bind | UvrA_inter
TC k141_321579 k141_321579_26 32442 33272 + 3.A.1.132.3
Gene ID: k141_321579_17
Type: CAZyme
Location: 17417 - 18343 (-)
Gene ID: k141_321579_18
Type: TC
Location: 18475 - 19302 (-)
Gene ID: k141_321579_19
Type: TC
Location: 19303 - 21318 (-)
Gene ID: k141_321579_20
Type: TC
Location: 21322 - 22278 (-)
Gene ID: k141_321579_21
Type: TC
Location: 22436 - 24049 (-)
Gene ID: k141_321579_22
Type: pfam
Location: 24415 - 26355 (-)
Gene ID: k141_321579_23
Type: TC
Location: 26362 - 28665 (-)
Gene ID: k141_321579_24
Type: pfam
Location: 28669 - 29169 (-)
Gene ID: k141_321579_25
Type: pfam
Location: 29303 - 32182 (-)
Gene ID: k141_321579_26
Type: TC
Location: 32442 - 33272 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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