Cluster: AG404_maxbin.023_CGC12
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 2
- Substrate:
- Genome ID: AG404_maxbin.023
- CGC Family ID: CGCFAM_03328
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_402842 | k141_402842_108 | 133511 | 136615 | + | 2.A.6.3.6 |
| pfam | k141_402842 | k141_402842_109 | 136622 | 136915 | + | P-II |
| CAZyme | k141_402842 | k141_402842_110 | 136987 | 139020 | - | GH13_8 |
| TC | k141_402842 | k141_402842_111 | 139270 | 140838 | + | 2.A.17.1.3 |
| pfam | k141_402842 | k141_402842_112 | 140940 | 141893 | + | EamA | EamA |
| NULL(UNKNOWN) | k141_402842 | k141_402842_113 | 141964 | 142347 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_402842 | k141_402842_114 | 142353 | 144827 | - | 8.A.3.1.2 |
| TC | k141_402842 | k141_402842_115 | 144861 | 145676 | - | 1.B.18.3.3 |
| CAZyme | k141_402842 | k141_402842_116 | 145938 | 147212 | + | GH13 |
| pfam | k141_402842 | k141_402842_117 | 147350 | 148936 | + | CN_hydrolase | NAD_synthase | tRNA_Me_trans |
| pfam | k141_402842 | k141_402842_118 | 148936 | 149370 | + | RseC_MucC |
| TC | k141_402842 | k141_402842_119 | 149380 | 150321 | + | 3.D.6.1.3 |
| TC | k141_402842 | k141_402842_120 | 150349 | 151692 | + | 3.D.6.1.2 |
| TC | k141_402842 | k141_402842_121 | 151715 | 152686 | + | 3.D.6.1.2 |
| TC | k141_402842 | k141_402842_122 | 152721 | 153302 | + | 3.D.6.1.4 |
| TC | k141_402842 | k141_402842_123 | 153343 | 153951 | + | 3.D.6.1.2 |
| TC | k141_402842 | k141_402842_124 | 153956 | 154534 | + | 3.D.6.1.2 |
Gene ID: k141_402842_108
Type: TC
Location: 133511 - 136615 (+)
Type: TC
Location: 133511 - 136615 (+)
Gene ID: k141_402842_109
Type: pfam
Location: 136622 - 136915 (+)
Type: pfam
Location: 136622 - 136915 (+)
Gene ID: k141_402842_110
Type: CAZyme
Location: 136987 - 139020 (-)
Type: CAZyme
Location: 136987 - 139020 (-)
Gene ID: k141_402842_111
Type: TC
Location: 139270 - 140838 (+)
Type: TC
Location: 139270 - 140838 (+)
Gene ID: k141_402842_112
Type: pfam
Location: 140940 - 141893 (+)
Type: pfam
Location: 140940 - 141893 (+)
Gene ID: k141_402842_113
Type:
Location: 141964 - 142347 (-)
Type:
Location: 141964 - 142347 (-)
Gene ID: k141_402842_114
Type: TC
Location: 142353 - 144827 (-)
Type: TC
Location: 142353 - 144827 (-)
Gene ID: k141_402842_115
Type: TC
Location: 144861 - 145676 (-)
Type: TC
Location: 144861 - 145676 (-)
Gene ID: k141_402842_116
Type: CAZyme
Location: 145938 - 147212 (+)
Type: CAZyme
Location: 145938 - 147212 (+)
Gene ID: k141_402842_117
Type: pfam
Location: 147350 - 148936 (+)
Type: pfam
Location: 147350 - 148936 (+)
Gene ID: k141_402842_118
Type: pfam
Location: 148936 - 149370 (+)
Type: pfam
Location: 148936 - 149370 (+)
Gene ID: k141_402842_119
Type: TC
Location: 149380 - 150321 (+)
Type: TC
Location: 149380 - 150321 (+)
Gene ID: k141_402842_120
Type: TC
Location: 150349 - 151692 (+)
Type: TC
Location: 150349 - 151692 (+)
Gene ID: k141_402842_121
Type: TC
Location: 151715 - 152686 (+)
Type: TC
Location: 151715 - 152686 (+)
Gene ID: k141_402842_122
Type: TC
Location: 152721 - 153302 (+)
Type: TC
Location: 152721 - 153302 (+)
Gene ID: k141_402842_123
Type: TC
Location: 153343 - 153951 (+)
Type: TC
Location: 153343 - 153951 (+)
Gene ID: k141_402842_124
Type: TC
Location: 153956 - 154534 (+)
Type: TC
Location: 153956 - 154534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944322005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.