Cluster: AG396_75_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: AG396_75
- CGC Family ID: CGCFAM_00002
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_175764 | k141_175764_30 | 32988 | 33971 | - | GT2 |
| pfam | k141_175764 | k141_175764_31 | 33958 | 35190 | - | Wzy_C |
| CAZyme | k141_175764 | k141_175764_32 | 35183 | 36283 | - | GT4 |
| pfam | k141_175764 | k141_175764_33 | 36284 | 37384 | - | PS_pyruv_trans |
| CAZyme | k141_175764 | k141_175764_34 | 37384 | 38484 | - | GT2 |
| NULL(UNKNOWN) | k141_175764 | k141_175764_35 | 39182 | 39682 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_175764 | k141_175764_36 | 39524 | 40189 | - | 9.B.18.1.2 |
Gene ID: k141_175764_30
Type: CAZyme
Location: 32988 - 33971 (-)
Type: CAZyme
Location: 32988 - 33971 (-)
Gene ID: k141_175764_31
Type: pfam
Location: 33958 - 35190 (-)
Type: pfam
Location: 33958 - 35190 (-)
Gene ID: k141_175764_32
Type: CAZyme
Location: 35183 - 36283 (-)
Type: CAZyme
Location: 35183 - 36283 (-)
Gene ID: k141_175764_33
Type: pfam
Location: 36284 - 37384 (-)
Type: pfam
Location: 36284 - 37384 (-)
Gene ID: k141_175764_34
Type: CAZyme
Location: 37384 - 38484 (-)
Type: CAZyme
Location: 37384 - 38484 (-)
Gene ID: k141_175764_35
Type:
Location: 39182 - 39682 (+)
Type:
Location: 39182 - 39682 (+)
Gene ID: k141_175764_36
Type: TC
Location: 39524 - 40189 (-)
Type: TC
Location: 39524 - 40189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.