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Cluster: AG396_75_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_149109 k141_149109_25 31763 33088 + GH4
TC k141_149109 k141_149109_26 33171 34733 + 4.A.1.1.3
TC k141_149109 k141_149109_27 34964 36217 - 2.A.1.2.25
NULL(UNKNOWN) k141_149109 k141_149109_28 36478 37347 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_149109 k141_149109_29 37461 38354 + Aldose_epim
TC k141_149109 k141_149109_30 38682 39608 + 3.A.1.3.20
TC k141_149109 k141_149109_31 39618 40766 + 3.A.1.3.20
TC k141_149109 k141_149109_32 40789 41574 + 3.A.1.3.20
Gene ID: k141_149109_25
Type: CAZyme
Location: 31763 - 33088 (+)
Gene ID: k141_149109_26
Type: TC
Location: 33171 - 34733 (+)
Gene ID: k141_149109_27
Type: TC
Location: 34964 - 36217 (-)
Gene ID: k141_149109_28
Type:
Location: 36478 - 37347 (+)
Gene ID: k141_149109_29
Type: pfam
Location: 37461 - 38354 (+)
Gene ID: k141_149109_30
Type: TC
Location: 38682 - 39608 (+)
Gene ID: k141_149109_31
Type: TC
Location: 39618 - 40766 (+)
Gene ID: k141_149109_32
Type: TC
Location: 40789 - 41574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149109_32 vegetarian > vegan 1.21311 0.00141

🧭 Explore Read Mapping of CGC

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