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Cluster: AG396_75_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_65855 k141_65855_131 134252 135178 - CE7
TC k141_65855 k141_65855_132 135310 136137 - 3.A.1.5.27
TC k141_65855 k141_65855_133 136138 138153 - 3.A.1.5.25
TC k141_65855 k141_65855_134 138157 139113 - 3.A.1.5.38
TC k141_65855 k141_65855_135 139269 140882 - 3.A.1.5.27
pfam k141_65855 k141_65855_136 141248 143188 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_65855 k141_65855_137 143195 145498 - 2.A.66.4.4
pfam k141_65855 k141_65855_138 145502 146002 - tRNA_edit
pfam k141_65855 k141_65855_139 146136 149015 - UvrA_DNA-bind | UvrA_inter
TC k141_65855 k141_65855_140 149275 150105 + 3.A.1.132.3
Gene ID: k141_65855_131
Type: CAZyme
Location: 134252 - 135178 (-)
Gene ID: k141_65855_132
Type: TC
Location: 135310 - 136137 (-)
Gene ID: k141_65855_133
Type: TC
Location: 136138 - 138153 (-)
Gene ID: k141_65855_134
Type: TC
Location: 138157 - 139113 (-)
Gene ID: k141_65855_135
Type: TC
Location: 139269 - 140882 (-)
Gene ID: k141_65855_136
Type: pfam
Location: 141248 - 143188 (-)
Gene ID: k141_65855_137
Type: TC
Location: 143195 - 145498 (-)
Gene ID: k141_65855_138
Type: pfam
Location: 145502 - 146002 (-)
Gene ID: k141_65855_139
Type: pfam
Location: 146136 - 149015 (-)
Gene ID: k141_65855_140
Type: TC
Location: 149275 - 150105 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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