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Cluster: AG395_maxbin.011_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_174496 k141_174496_13 14669 15409 - CE14
TF k141_174496 k141_174496_14 15537 16763 + HTH_1 | HTH_1
pfam k141_174496 k141_174496_15 16760 18022 - LigB | LigA
TC k141_174496 k141_174496_16 18036 19406 - 2.A.1.15.1
TF k141_174496 k141_174496_17 19618 20562 - LacI
TC k141_174496 k141_174496_18 20853 21167 + 4.A.3.2.6
TC k141_174496 k141_174496_19 21179 22501 + 4.A.3.2.6
TC k141_174496 k141_174496_20 22599 22901 + 4.A.3.2.6
Gene ID: k141_174496_13
Type: CAZyme
Location: 14669 - 15409 (-)
Gene ID: k141_174496_14
Type: TF
Location: 15537 - 16763 (+)
Gene ID: k141_174496_15
Type: pfam
Location: 16760 - 18022 (-)
Gene ID: k141_174496_16
Type: TC
Location: 18036 - 19406 (-)
Gene ID: k141_174496_17
Type: TF
Location: 19618 - 20562 (-)
Gene ID: k141_174496_18
Type: TC
Location: 20853 - 21167 (+)
Gene ID: k141_174496_19
Type: TC
Location: 21179 - 22501 (+)
Gene ID: k141_174496_20
Type: TC
Location: 22599 - 22901 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_174496_19 vegetarian > omnivore 1.56222 0.03153
k141_174496_19 vegetarian > vegan 1.49241 0.01536
k141_174496_20 vegetarian > omnivore 2.00207 0.03153

🧭 Explore Read Mapping of CGC

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