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Cluster: AG395_maxbin.011_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12838 k141_12838_261 279617 280396 - 3.A.1.14.16
TC k141_12838 k141_12838_262 280389 281384 - 3.A.1.14.5
TC k141_12838 k141_12838_263 281384 282202 - 3.A.1.14.16
pfam k141_12838 k141_12838_264 282199 283230 - HemS | HemS | ChuX_HutX | ChuX_HutX
TC k141_12838 k141_12838_265 283302 285665 - 1.B.14.2.7
pfam k141_12838 k141_12838_266 285881 286174 + Rdx
pfam k141_12838 k141_12838_267 286214 287923 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC k141_12838 k141_12838_268 287959 288900 - 2.A.69.3.5
TF k141_12838 k141_12838_269 289087 289974 + HTH_1
pfam k141_12838 k141_12838_270 290042 290383 + YgbA_NO
TC k141_12838 k141_12838_271 290443 291297 - 3.A.1.15.7
TC k141_12838 k141_12838_272 291291 292139 - 3.A.1.15.7
TC k141_12838 k141_12838_273 292136 292957 - 3.A.1.15.7
TC k141_12838 k141_12838_274 292954 293871 - 3.A.1.15.7
TF k141_12838 k141_12838_275 294053 295015 - LacI
pfam k141_12838 k141_12838_276 295072 295986 - ROK
TC k141_12838 k141_12838_277 296037 296351 - 4.A.3.2.7
TC k141_12838 k141_12838_278 296375 297697 - 4.A.3.2.6
TC k141_12838 k141_12838_279 297707 298021 - 4.A.3.2.6
TC k141_12838 k141_12838_280 298199 299470 + 4.A.3.2.6
pfam k141_12838 k141_12838_281 299733 301070 + LamB
CAZyme k141_12838 k141_12838_282 301083 303275 + CBM35 | GH5_41
CAZyme k141_12838 k141_12838_283 303325 304725 + GH1
Gene ID: k141_12838_261
Type: TC
Location: 279617 - 280396 (-)
Gene ID: k141_12838_262
Type: TC
Location: 280389 - 281384 (-)
Gene ID: k141_12838_263
Type: TC
Location: 281384 - 282202 (-)
Gene ID: k141_12838_264
Type: pfam
Location: 282199 - 283230 (-)
Gene ID: k141_12838_265
Type: TC
Location: 283302 - 285665 (-)
Gene ID: k141_12838_266
Type: pfam
Location: 285881 - 286174 (+)
Gene ID: k141_12838_267
Type: pfam
Location: 286214 - 287923 (-)
Gene ID: k141_12838_268
Type: TC
Location: 287959 - 288900 (-)
Gene ID: k141_12838_269
Type: TF
Location: 289087 - 289974 (+)
Gene ID: k141_12838_270
Type: pfam
Location: 290042 - 290383 (+)
Gene ID: k141_12838_271
Type: TC
Location: 290443 - 291297 (-)
Gene ID: k141_12838_272
Type: TC
Location: 291291 - 292139 (-)
Gene ID: k141_12838_273
Type: TC
Location: 292136 - 292957 (-)
Gene ID: k141_12838_274
Type: TC
Location: 292954 - 293871 (-)
Gene ID: k141_12838_275
Type: TF
Location: 294053 - 295015 (-)
Gene ID: k141_12838_276
Type: pfam
Location: 295072 - 295986 (-)
Gene ID: k141_12838_277
Type: TC
Location: 296037 - 296351 (-)
Gene ID: k141_12838_278
Type: TC
Location: 296375 - 297697 (-)
Gene ID: k141_12838_279
Type: TC
Location: 297707 - 298021 (-)
Gene ID: k141_12838_280
Type: TC
Location: 298199 - 299470 (+)
Gene ID: k141_12838_281
Type: pfam
Location: 299733 - 301070 (+)
Gene ID: k141_12838_282
Type: CAZyme
Location: 301083 - 303275 (+)
Gene ID: k141_12838_283
Type: CAZyme
Location: 303325 - 304725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12838_272 vegetarian > omnivore 1.00910 0.03153

🧭 Explore Read Mapping of CGC

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