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Cluster: AG395_maxbin.011_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12838 k141_12838_89 87716 88945 - 2.A.42.2.5
TC k141_12838 k141_12838_90 89070 89531 - 2.A.117.1.3
TF k141_12838 k141_12838_91 89634 90503 + HTH_1
pfam k141_12838 k141_12838_92 90622 91800 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_12838 k141_12838_93 92050 92745 + 1.B.35.1.7
CAZyme k141_12838 k141_12838_94 92879 94054 - PL22 | PL22
pfam k141_12838 k141_12838_95 94542 95303 + adh_short | adh_short_C2
TC k141_12838 k141_12838_96 95602 97023 + 2.A.1.1.2
TF k141_12838 k141_12838_97 97020 98015 - LacI
TC k141_12838 k141_12838_98 98257 99498 + 2.A.1.5.2
CAZyme k141_12838 k141_12838_99 99515 100951 + GH32
TC k141_12838 k141_12838_100 101073 102416 + 1.B.15.1.1
TC k141_12838 k141_12838_101 102476 103762 - 3.A.1.1.11
TC k141_12838 k141_12838_102 103779 104906 - 3.A.1.1.11
TC k141_12838 k141_12838_103 104919 105821 - 3.A.1.1.11
TC k141_12838 k141_12838_104 105814 106704 - 3.A.1.1.11
Gene ID: k141_12838_89
Type: TC
Location: 87716 - 88945 (-)
Gene ID: k141_12838_90
Type: TC
Location: 89070 - 89531 (-)
Gene ID: k141_12838_91
Type: TF
Location: 89634 - 90503 (+)
Gene ID: k141_12838_92
Type: pfam
Location: 90622 - 91800 (+)
Gene ID: k141_12838_93
Type: TC
Location: 92050 - 92745 (+)
Gene ID: k141_12838_94
Type: CAZyme
Location: 92879 - 94054 (-)
Gene ID: k141_12838_95
Type: pfam
Location: 94542 - 95303 (+)
Gene ID: k141_12838_96
Type: TC
Location: 95602 - 97023 (+)
Gene ID: k141_12838_97
Type: TF
Location: 97020 - 98015 (-)
Gene ID: k141_12838_98
Type: TC
Location: 98257 - 99498 (+)
Gene ID: k141_12838_99
Type: CAZyme
Location: 99515 - 100951 (+)
Gene ID: k141_12838_100
Type: TC
Location: 101073 - 102416 (+)
Gene ID: k141_12838_101
Type: TC
Location: 102476 - 103762 (-)
Gene ID: k141_12838_102
Type: TC
Location: 103779 - 104906 (-)
Gene ID: k141_12838_103
Type: TC
Location: 104919 - 105821 (-)
Gene ID: k141_12838_104
Type: TC
Location: 105814 - 106704 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12838_92 vegetarian > omnivore 1.42638 0.03153
k141_12838_92 vegetarian > vegan 2.00531 0.01536
k141_12838_101 vegetarian > omnivore 1.56517 0.02095
k141_12838_103 vegetarian > omnivore 1.16208 0.03153

🧭 Explore Read Mapping of CGC

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