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Cluster: AG395_maxbin.011_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12838 k141_12838_23 23147 25156 - 5.A.1.5.1
NULL(UNKNOWN) k141_12838 k141_12838_24 25206 25565 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_12838 k141_12838_25 25690 27123 - GH1
TF k141_12838 k141_12838_26 27243 27998 - HTH_6
pfam k141_12838 k141_12838_27 28022 28333 + ASCH
TC k141_12838 k141_12838_28 28497 29156 + 1.C.113.1.10
Gene ID: k141_12838_23
Type: TC
Location: 23147 - 25156 (-)
Gene ID: k141_12838_24
Type:
Location: 25206 - 25565 (-)
Gene ID: k141_12838_25
Type: CAZyme
Location: 25690 - 27123 (-)
Gene ID: k141_12838_26
Type: TF
Location: 27243 - 27998 (-)
Gene ID: k141_12838_27
Type: pfam
Location: 28022 - 28333 (+)
Gene ID: k141_12838_28
Type: TC
Location: 28497 - 29156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_12838_23 vegetarian > omnivore 1.54614 0.03153
k141_12838_23 vegetarian > vegan 1.71391 0.02314
k141_12838_24 vegetarian > omnivore 2.13119 0.03153
k141_12838_24 vegetarian > vegan 3.12608 0.00863
k141_12838_25 vegan > omnivore 1.30730 0.00566
k141_12838_26 vegetarian > omnivore 1.10497 0.02569
k141_12838_26 vegetarian > vegan 1.10409 0.01536

🧭 Explore Read Mapping of CGC

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