Cluster: AG395_maxbin.011_CGC45
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: AG395_maxbin.011
- CGC Family ID: CGCFAM_00236
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_135874 | k141_135874_332 | 358143 | 360341 | + | 1.B.14.1.15 |
| TC | k141_135874 | k141_135874_333 | 360448 | 361824 | + | 2.A.3.1.1 |
| TC | k141_135874 | k141_135874_334 | 361976 | 363217 | + | 2.A.1.10.4 |
| pfam | k141_135874 | k141_135874_335 | 363234 | 364256 | + | AP_endonuc_2 |
| CAZyme | k141_135874 | k141_135874_336 | 364258 | 365409 | + | GH179 |
| NULL(UNKNOWN) | k141_135874 | k141_135874_337 | 365429 | 365845 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_135874 | k141_135874_338 | 366078 | 367058 | + | LacI |
| TC | k141_135874 | k141_135874_339 | 367062 | 368306 | - | 1.A.23.4.5 |
| TC | k141_135874 | k141_135874_340 | 368377 | 369804 | - | 2.A.1.3.38 |
Gene ID: k141_135874_332
Type: TC
Location: 358143 - 360341 (+)
Type: TC
Location: 358143 - 360341 (+)
Gene ID: k141_135874_333
Type: TC
Location: 360448 - 361824 (+)
Type: TC
Location: 360448 - 361824 (+)
Gene ID: k141_135874_334
Type: TC
Location: 361976 - 363217 (+)
Type: TC
Location: 361976 - 363217 (+)
Gene ID: k141_135874_335
Type: pfam
Location: 363234 - 364256 (+)
Type: pfam
Location: 363234 - 364256 (+)
Gene ID: k141_135874_336
Type: CAZyme
Location: 364258 - 365409 (+)
Type: CAZyme
Location: 364258 - 365409 (+)
Gene ID: k141_135874_337
Type:
Location: 365429 - 365845 (-)
Type:
Location: 365429 - 365845 (-)
Gene ID: k141_135874_338
Type: TF
Location: 366078 - 367058 (+)
Type: TF
Location: 366078 - 367058 (+)
Gene ID: k141_135874_339
Type: TC
Location: 367062 - 368306 (-)
Type: TC
Location: 367062 - 368306 (-)
Gene ID: k141_135874_340
Type: TC
Location: 368377 - 369804 (-)
Type: TC
Location: 368377 - 369804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Klebsiella
Species
Klebsiella variicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_135874_334 | vegetarian > omnivore | 1.21882 | 0.03153 |
| k141_135874_335 | vegetarian > vegan | 1.40258 | 0.01536 |
| k141_135874_338 | vegetarian > omnivore | 2.14836 | 0.02425 |
| k141_135874_338 | vegetarian > vegan | 1.26771 | 0.01639 |