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Cluster: AG395_maxbin.011_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_78244 k141_78244_20 23668 24393 + GT51
TC k141_78244 k141_78244_21 24457 24729 - 8.A.8.1.5
pfam k141_78244 k141_78244_22 24726 25580 - RapZ-like_N | PapZ_C
TC k141_78244 k141_78244_23 25626 26114 - 4.A.2.1.4
pfam k141_78244 k141_78244_24 26185 26472 - Ribosomal_S30AE
pfam k141_78244 k141_78244_25 26495 27928 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_78244 k141_78244_26 27976 28701 - 1.B.42.1.2
TC k141_78244 k141_78244_27 28708 29253 - 1.B.42.1.2
TC k141_78244 k141_78244_28 29222 29797 - 1.B.42.1.2
pfam k141_78244 k141_78244_29 29794 30360 - Hydrolase_3
STP k141_78244 k141_78244_30 30375 31361 - CBS | CBS | SIS
TC k141_78244 k141_78244_31 31376 32353 - 2.A.19.5.1
TC k141_78244 k141_78244_32 32563 33375 + 3.A.1.27.3
TC k141_78244 k141_78244_33 33383 34165 + 3.A.1.27.3
TC k141_78244 k141_78244_34 34170 34721 + 3.A.1.27.3
TC k141_78244 k141_78244_35 34740 35375 + 3.A.1.27.3
TC k141_78244 k141_78244_36 35375 35665 + 3.A.1.27.3
Gene ID: k141_78244_20
Type: CAZyme
Location: 23668 - 24393 (+)
Gene ID: k141_78244_21
Type: TC
Location: 24457 - 24729 (-)
Gene ID: k141_78244_22
Type: pfam
Location: 24726 - 25580 (-)
Gene ID: k141_78244_23
Type: TC
Location: 25626 - 26114 (-)
Gene ID: k141_78244_24
Type: pfam
Location: 26185 - 26472 (-)
Gene ID: k141_78244_25
Type: pfam
Location: 26495 - 27928 (-)
Gene ID: k141_78244_26
Type: TC
Location: 27976 - 28701 (-)
Gene ID: k141_78244_27
Type: TC
Location: 28708 - 29253 (-)
Gene ID: k141_78244_28
Type: TC
Location: 29222 - 29797 (-)
Gene ID: k141_78244_29
Type: pfam
Location: 29794 - 30360 (-)
Gene ID: k141_78244_30
Type: STP
Location: 30375 - 31361 (-)
Gene ID: k141_78244_31
Type: TC
Location: 31376 - 32353 (-)
Gene ID: k141_78244_32
Type: TC
Location: 32563 - 33375 (+)
Gene ID: k141_78244_33
Type: TC
Location: 33383 - 34165 (+)
Gene ID: k141_78244_34
Type: TC
Location: 34170 - 34721 (+)
Gene ID: k141_78244_35
Type: TC
Location: 34740 - 35375 (+)
Gene ID: k141_78244_36
Type: TC
Location: 35375 - 35665 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_78244_30 vegetarian > omnivore 1.70771 0.02451
k141_78244_30 vegetarian > vegan 2.38720 0.00863
k141_78244_32 vegetarian > vegan 1.11613 0.01536

🧭 Explore Read Mapping of CGC

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