dbCAN HGM

Cluster: AG390_93_CGC61

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	k141_365156	k141_365156_46	42296	43096	-	3.A.1.24.1
pfam	k141_365156	k141_365156_47	43302	43721	-	Acetyltransf_1 \| Acetyltransf_7 \| Acetyltransf_10
STP	k141_365156	k141_365156_48	43910	44479	+	TetR_N
TC	k141_365156	k141_365156_49	44625	45749	+	2.A.6.2.19
TC	k141_365156	k141_365156_50	45749	48859	+	2.A.6.2.19
TC	k141_365156	k141_365156_51	48859	50223	+	2.A.6.2.19
TF	k141_365156	k141_365156_52	50325	51275	-	LacI
TC	k141_365156	k141_365156_53	51569	51883	+	4.A.3.2.6
TC	k141_365156	k141_365156_54	51895	53220	+	4.A.3.2.6
CAZyme	k141_365156	k141_365156_55	53238	54611	+	GH1
TC	k141_365156	k141_365156_56	54623	54925	+	4.A.3.2.1
pfam	k141_365156	k141_365156_57	55060	56439	+	LamB
TC	k141_365156	k141_365156_58	56574	57479	+	2.A.7.3.12
TC	k141_365156	k141_365156_59	57528	58718	-	2.A.1.2.26

Gene ID: k141_365156_46
Type: TC
Location: 42296 - 43096 (-)

Gene ID: k141_365156_47
Type: pfam
Location: 43302 - 43721 (-)

Gene ID: k141_365156_48
Type: STP
Location: 43910 - 44479 (+)

Gene ID: k141_365156_49
Type: TC
Location: 44625 - 45749 (+)

Gene ID: k141_365156_50
Type: TC
Location: 45749 - 48859 (+)

Gene ID: k141_365156_51
Type: TC
Location: 48859 - 50223 (+)

Gene ID: k141_365156_52
Type: TF
Location: 50325 - 51275 (-)

Gene ID: k141_365156_53
Type: TC
Location: 51569 - 51883 (+)

Gene ID: k141_365156_54
Type: TC
Location: 51895 - 53220 (+)

Gene ID: k141_365156_55
Type: CAZyme
Location: 53238 - 54611 (+)

Gene ID: k141_365156_56
Type: TC
Location: 54623 - 54925 (+)

Gene ID: k141_365156_57
Type: pfam
Location: 55060 - 56439 (+)

Gene ID: k141_365156_58
Type: TC
Location: 56574 - 57479 (+)

Gene ID: k141_365156_59
Type: TC
Location: 57528 - 58718 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
k141_365156_46	vegetarian > omnivore	1.17887	0.03862
k141_365156_46	vegetarian > vegan	1.62071	0.02247
k141_365156_47	vegetarian > omnivore	1.93082	0.03862
k141_365156_49	vegetarian > omnivore	2.75056	0.03862
k141_365156_51	vegetarian > omnivore	1.41715	0.03862
k141_365156_51	vegetarian > vegan	1.32670	0.02247
k141_365156_52	vegetarian > omnivore	1.63934	0.03862
k141_365156_52	vegetarian > vegan	1.42765	0.02247
k141_365156_53	vegetarian > omnivore	1.82219	0.03862
k141_365156_53	vegetarian > vegan	1.15892	0.02247
k141_365156_54	vegetarian > omnivore	1.17077	0.03862
k141_365156_55	vegetarian > omnivore	1.34028	0.02543
k141_365156_56	vegetarian > omnivore	1.97179	0.03862
k141_365156_57	vegetarian > omnivore	1.32231	0.03862
k141_365156_57	vegetarian > vegan	1.76516	0.02247
k141_365156_58	vegetarian > omnivore	1.25435	0.03862