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Cluster: AG390_93_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_79520 k141_79520_36 32658 33269 - 2.A.76.1.9
TF k141_79520 k141_79520_37 33384 33836 + HTH_11
TC k141_79520 k141_79520_38 33876 35105 - 2.A.42.2.5
TC k141_79520 k141_79520_39 35226 35687 - 2.A.117.1.3
TF k141_79520 k141_79520_40 35793 36659 + HTH_1
pfam k141_79520 k141_79520_41 36753 37931 + Thiolase_N | ketoacyl-synt | Thiolase_C
TC k141_79520 k141_79520_42 38175 38858 + 1.B.35.1.5
CAZyme k141_79520 k141_79520_43 38966 40141 - PL22 | PL22
pfam k141_79520 k141_79520_44 40441 41277 + KduI
pfam k141_79520 k141_79520_45 41341 42102 + adh_short | KR | adh_short_C2
TC k141_79520 k141_79520_46 42415 43830 + 2.A.1.1.2
TC k141_79520 k141_79520_47 43900 45186 - 3.A.1.1.11
TC k141_79520 k141_79520_48 45200 46324 - 3.A.1.1.11
TC k141_79520 k141_79520_49 46337 47239 - 3.A.1.1.11
TC k141_79520 k141_79520_50 47232 48122 - 3.A.1.1.11
Gene ID: k141_79520_36
Type: TC
Location: 32658 - 33269 (-)
Gene ID: k141_79520_37
Type: TF
Location: 33384 - 33836 (+)
Gene ID: k141_79520_38
Type: TC
Location: 33876 - 35105 (-)
Gene ID: k141_79520_39
Type: TC
Location: 35226 - 35687 (-)
Gene ID: k141_79520_40
Type: TF
Location: 35793 - 36659 (+)
Gene ID: k141_79520_41
Type: pfam
Location: 36753 - 37931 (+)
Gene ID: k141_79520_42
Type: TC
Location: 38175 - 38858 (+)
Gene ID: k141_79520_43
Type: CAZyme
Location: 38966 - 40141 (-)
Gene ID: k141_79520_44
Type: pfam
Location: 40441 - 41277 (+)
Gene ID: k141_79520_45
Type: pfam
Location: 41341 - 42102 (+)
Gene ID: k141_79520_46
Type: TC
Location: 42415 - 43830 (+)
Gene ID: k141_79520_47
Type: TC
Location: 43900 - 45186 (-)
Gene ID: k141_79520_48
Type: TC
Location: 45200 - 46324 (-)
Gene ID: k141_79520_49
Type: TC
Location: 46337 - 47239 (-)
Gene ID: k141_79520_50
Type: TC
Location: 47232 - 48122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_79520_38 vegetarian > omnivore 1.94035 0.03862
k141_79520_40 vegetarian > vegan 1.37715 0.02247
k141_79520_41 vegetarian > omnivore 2.09258 0.02543
k141_79520_41 vegetarian > vegan 1.43855 0.02247
k141_79520_42 vegetarian > omnivore 1.35364 0.03862
k141_79520_42 vegetarian > vegan 1.08435 0.02247
k141_79520_43 vegetarian > omnivore 1.62684 0.03862
k141_79520_43 vegetarian > vegan 1.42966 0.02247
k141_79520_47 vegetarian > omnivore 1.71342 0.03630
k141_79520_47 vegetarian > vegan 1.14442 0.02247

🧭 Explore Read Mapping of CGC

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