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Cluster: AG390_93_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_101339 k141_101339_32 35691 36683 + 3.A.1.2.4
TC k141_101339 k141_101339_33 36756 38297 + 3.A.1.2.4
TC k141_101339 k141_101339_34 38275 39456 + 3.A.1.2.4
TF k141_101339 k141_101339_35 39490 40668 + HTH_AraC | HTH_AraC
CAZyme k141_101339 k141_101339_36 40706 41530 - GH73
CAZyme k141_101339 k141_101339_37 41845 43875 + GH13_19
STP k141_101339 k141_101339_38 44070 45326 + Aminotran_1_2
TC k141_101339 k141_101339_39 45331 45786 - 3.D.1.9.2
Gene ID: k141_101339_32
Type: TC
Location: 35691 - 36683 (+)
Gene ID: k141_101339_33
Type: TC
Location: 36756 - 38297 (+)
Gene ID: k141_101339_34
Type: TC
Location: 38275 - 39456 (+)
Gene ID: k141_101339_35
Type: TF
Location: 39490 - 40668 (+)
Gene ID: k141_101339_36
Type: CAZyme
Location: 40706 - 41530 (-)
Gene ID: k141_101339_37
Type: CAZyme
Location: 41845 - 43875 (+)
Gene ID: k141_101339_38
Type: STP
Location: 44070 - 45326 (+)
Gene ID: k141_101339_39
Type: TC
Location: 45331 - 45786 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_101339_37 vegan > omnivore 1.05692 0.02413
k141_101339_39 vegan > omnivore 5.88045 0.03321
k141_101339_39 vegetarian > omnivore 5.39783 0.03862

🧭 Explore Read Mapping of CGC

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