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Cluster: AG390_93_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_324339 k141_324339_108 108537 110180 - GH13_29
TC k141_324339 k141_324339_109 110232 111650 - 4.A.1.2.4
TF k141_324339 k141_324339_110 111778 112725 - LacI
TC k141_324339 k141_324339_111 113117 115825 + 3.A.3.4.1
CAZyme k141_324339 k141_324339_112 115991 118375 + GH20
CAZyme k141_324339 k141_324339_113 118434 119894 - AA10 | CBM73
Gene ID: k141_324339_108
Type: CAZyme
Location: 108537 - 110180 (-)
Gene ID: k141_324339_109
Type: TC
Location: 110232 - 111650 (-)
Gene ID: k141_324339_110
Type: TF
Location: 111778 - 112725 (-)
Gene ID: k141_324339_111
Type: TC
Location: 113117 - 115825 (+)
Gene ID: k141_324339_112
Type: CAZyme
Location: 115991 - 118375 (+)
Gene ID: k141_324339_113
Type: CAZyme
Location: 118434 - 119894 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_324339_110 vegetarian > vegan 1.10667 0.02247
k141_324339_112 vegetarian > omnivore 1.02207 0.03862

🧭 Explore Read Mapping of CGC

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