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Cluster: AG390_93_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_256511 k141_256511_29 30038 32218 + AA2 | AA2
pfam k141_256511 k141_256511_30 32258 33361 - Fe-ADH | Fe-ADH_2
pfam k141_256511 k141_256511_31 33374 34036 - TAL_FSA
TC k141_256511 k141_256511_32 34051 36552 - 4.A.2.1.10
TC k141_256511 k141_256511_33 36855 37934 + 4.A.2.1.10
TC k141_256511 k141_256511_34 37949 38269 + 4.A.2.1.10
pfam k141_256511 k141_256511_35 38323 40617 + Gly_radical | PFL-like
pfam k141_256511 k141_256511_36 40583 41458 + Radical_SAM | Fer4_12
TC k141_256511 k141_256511_37 41461 41817 + 4.A.2.1.10
Gene ID: k141_256511_29
Type: CAZyme
Location: 30038 - 32218 (+)
Gene ID: k141_256511_30
Type: pfam
Location: 32258 - 33361 (-)
Gene ID: k141_256511_31
Type: pfam
Location: 33374 - 34036 (-)
Gene ID: k141_256511_32
Type: TC
Location: 34051 - 36552 (-)
Gene ID: k141_256511_33
Type: TC
Location: 36855 - 37934 (+)
Gene ID: k141_256511_34
Type: TC
Location: 37949 - 38269 (+)
Gene ID: k141_256511_35
Type: pfam
Location: 38323 - 40617 (+)
Gene ID: k141_256511_36
Type: pfam
Location: 40583 - 41458 (+)
Gene ID: k141_256511_37
Type: TC
Location: 41461 - 41817 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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