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Cluster: AG390_93_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_346620 k141_346620_28 19548 20300 - 3.A.1.3.10
TC k141_346620 k141_346620_29 20297 20965 - 3.A.1.3.10
STP k141_346620 k141_346620_30 20987 21973 - PALP
TC k141_346620 k141_346620_31 22081 22881 - 3.A.1.3.10
pfam k141_346620 k141_346620_32 22968 23519 - Phage_int_SAM_1
STP k141_346620 k141_346620_33 23574 24293 - Sigma70_r2 | Sigma70_r3 | Sigma70_r4
CAZyme k141_346620 k141_346620_34 24467 25270 - GT2
CAZyme k141_346620 k141_346620_35 25301 28939 - GT2
Gene ID: k141_346620_28
Type: TC
Location: 19548 - 20300 (-)
Gene ID: k141_346620_29
Type: TC
Location: 20297 - 20965 (-)
Gene ID: k141_346620_30
Type: STP
Location: 20987 - 21973 (-)
Gene ID: k141_346620_31
Type: TC
Location: 22081 - 22881 (-)
Gene ID: k141_346620_32
Type: pfam
Location: 22968 - 23519 (-)
Gene ID: k141_346620_33
Type: STP
Location: 23574 - 24293 (-)
Gene ID: k141_346620_34
Type: CAZyme
Location: 24467 - 25270 (-)
Gene ID: k141_346620_35
Type: CAZyme
Location: 25301 - 28939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_346620_30 vegetarian > omnivore 1.12281 0.03862
k141_346620_30 vegetarian > vegan 2.56774 0.00863
k141_346620_32 vegetarian > vegan 1.02131 0.02247

🧭 Explore Read Mapping of CGC

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