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Cluster: AG390_93_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_319790 k141_319790_42 45809 46624 + 2.A.113.1.1
CAZyme k141_319790 k141_319790_43 46658 49750 - GH2
TF k141_319790 k141_319790_44 49854 50921 - LacI
TC k141_319790 k141_319790_45 50999 51610 - 2.A.115.2.6
Gene ID: k141_319790_42
Type: TC
Location: 45809 - 46624 (+)
Gene ID: k141_319790_43
Type: CAZyme
Location: 46658 - 49750 (-)
Gene ID: k141_319790_44
Type: TF
Location: 49854 - 50921 (-)
Gene ID: k141_319790_45
Type: TC
Location: 50999 - 51610 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_319790_45 vegetarian > omnivore 2.95451 0.03862

🧭 Explore Read Mapping of CGC

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