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Cluster: AG390_93_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_79520 k141_79520_15 14975 16411 - GH1
TF k141_79520 k141_79520_16 16524 17255 - HTH_6
NULL(UNKNOWN) k141_79520 k141_79520_17 17330 17497 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_79520 k141_79520_18 17521 18180 + 1.C.113.1.10
Gene ID: k141_79520_15
Type: CAZyme
Location: 14975 - 16411 (-)
Gene ID: k141_79520_16
Type: TF
Location: 16524 - 17255 (-)
Gene ID: k141_79520_17
Type:
Location: 17330 - 17497 (-)
Gene ID: k141_79520_18
Type: TC
Location: 17521 - 18180 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_79520_15 vegan > omnivore 1.60175 0.01287
k141_79520_16 vegetarian > omnivore 1.30481 0.03630
k141_79520_16 vegetarian > vegan 1.37948 0.02247

🧭 Explore Read Mapping of CGC

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