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Cluster: AG390_93_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_331877 k141_331877_41 40740 42212 - 3.A.1.26.3
TF k141_331877 k141_331877_42 42280 43068 - HTH_1
TC k141_331877 k141_331877_43 43198 43347 + 2.A.6.2.49
TC k141_331877 k141_331877_44 43526 44302 + 3.A.1.8.1
TC k141_331877 k141_331877_45 44299 44988 + 3.A.1.8.1
TC k141_331877 k141_331877_46 44991 46049 + 3.A.1.8.1
pfam k141_331877 k141_331877_47 46050 46868 - Hydrolase | S6PP | S6PP | Hydrolase_3
pfam k141_331877 k141_331877_48 47009 48004 + Lactonase
CAZyme k141_331877 k141_331877_49 48111 49394 - CE8
Gene ID: k141_331877_41
Type: TC
Location: 40740 - 42212 (-)
Gene ID: k141_331877_42
Type: TF
Location: 42280 - 43068 (-)
Gene ID: k141_331877_43
Type: TC
Location: 43198 - 43347 (+)
Gene ID: k141_331877_44
Type: TC
Location: 43526 - 44302 (+)
Gene ID: k141_331877_45
Type: TC
Location: 44299 - 44988 (+)
Gene ID: k141_331877_46
Type: TC
Location: 44991 - 46049 (+)
Gene ID: k141_331877_47
Type: pfam
Location: 46050 - 46868 (-)
Gene ID: k141_331877_48
Type: pfam
Location: 47009 - 48004 (+)
Gene ID: k141_331877_49
Type: CAZyme
Location: 48111 - 49394 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_331877_43 vegetarian > vegan 1.37257 0.02247

🧭 Explore Read Mapping of CGC

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