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Cluster: AG390_93_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_160243 k141_160243_565 626052 627476 - GT20
pfam k141_160243 k141_160243_566 627451 628254 - Trehalose_PPase
TC k141_160243 k141_160243_567 628431 629417 - 3.A.1.2.2
TC k141_160243 k141_160243_568 629432 630946 - 3.A.1.2.2
TC k141_160243 k141_160243_569 631018 632007 - 3.A.1.2.2
pfam k141_160243 k141_160243_570 632807 633310 + Ferritin
TC k141_160243 k141_160243_571 633465 634808 + 2.A.13.1.2
Gene ID: k141_160243_565
Type: CAZyme
Location: 626052 - 627476 (-)
Gene ID: k141_160243_566
Type: pfam
Location: 627451 - 628254 (-)
Gene ID: k141_160243_567
Type: TC
Location: 628431 - 629417 (-)
Gene ID: k141_160243_568
Type: TC
Location: 629432 - 630946 (-)
Gene ID: k141_160243_569
Type: TC
Location: 631018 - 632007 (-)
Gene ID: k141_160243_570
Type: pfam
Location: 632807 - 633310 (+)
Gene ID: k141_160243_571
Type: TC
Location: 633465 - 634808 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_160243_571 vegetarian > omnivore 1.54537 0.03862

🧭 Explore Read Mapping of CGC

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