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Cluster: AG390_93_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_160243 k141_160243_287 319649 320563 - 1.B.21.1.1
TC k141_160243 k141_160243_288 320630 321712 - 3.A.1.1.46
pfam k141_160243 k141_160243_289 321715 322392 - Hydrolase | HAD_2
CAZyme k141_160243 k141_160243_290 322382 324661 - GH65
CAZyme k141_160243 k141_160243_291 324655 325710 - GH179
pfam k141_160243 k141_160243_292 325725 326513 - AP_endonuc_2
pfam k141_160243 k141_160243_293 326532 327584 - ADH_zinc_N
TC k141_160243 k141_160243_294 327613 328455 - 3.A.1.1.46
TC k141_160243 k141_160243_295 328442 329323 - 3.A.1.1.46
TC k141_160243 k141_160243_296 329347 330639 - 3.A.1.1.46
CAZyme k141_160243 k141_160243_297 330655 332340 - GH13_18
Gene ID: k141_160243_287
Type: TC
Location: 319649 - 320563 (-)
Gene ID: k141_160243_288
Type: TC
Location: 320630 - 321712 (-)
Gene ID: k141_160243_289
Type: pfam
Location: 321715 - 322392 (-)
Gene ID: k141_160243_290
Type: CAZyme
Location: 322382 - 324661 (-)
Gene ID: k141_160243_291
Type: CAZyme
Location: 324655 - 325710 (-)
Gene ID: k141_160243_292
Type: pfam
Location: 325725 - 326513 (-)
Gene ID: k141_160243_293
Type: pfam
Location: 326532 - 327584 (-)
Gene ID: k141_160243_294
Type: TC
Location: 327613 - 328455 (-)
Gene ID: k141_160243_295
Type: TC
Location: 328442 - 329323 (-)
Gene ID: k141_160243_296
Type: TC
Location: 329347 - 330639 (-)
Gene ID: k141_160243_297
Type: CAZyme
Location: 330655 - 332340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_160243_287 vegetarian > omnivore 2.27482 0.02673

🧭 Explore Read Mapping of CGC

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