Cluster: AG390_93_CGC27
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: AG390_93
- CGC Family ID: CGCFAM_03293
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_160243 | k141_160243_133 | 146657 | 149797 | - | 2.A.6.1.3 |
| TC | k141_160243 | k141_160243_134 | 149808 | 151049 | - | 2.A.6.1.4 |
| pfam | k141_160243 | k141_160243_135 | 151061 | 151402 | - | CusF_Ec |
| TC | k141_160243 | k141_160243_136 | 151430 | 152815 | - | 1.B.17.3.4 |
| TF | k141_160243 | k141_160243_137 | 152978 | 153661 | + | Trans_reg_C |
| TC | k141_160243 | k141_160243_138 | 153651 | 155108 | + | 2.A.21.9.1 |
| TF | k141_160243 | k141_160243_139 | 155076 | 155987 | - | HTH_1 |
| TC | k141_160243 | k141_160243_140 | 156105 | 157514 | + | 2.A.1.3.17 |
| pfam | k141_160243 | k141_160243_141 | 157551 | 158546 | - | DUF2891 |
| TC | k141_160243 | k141_160243_142 | 158570 | 159556 | - | 9.B.211.1.1 |
| pfam | k141_160243 | k141_160243_143 | 159553 | 160275 | - | DUF969 |
| TF | k141_160243 | k141_160243_144 | 160491 | 161039 | + | 0042156 |
| CAZyme | k141_160243 | k141_160243_145 | 161042 | 163117 | - | CBM48 | GH13_11 |
| CAZyme | k141_160243 | k141_160243_146 | 163133 | 165601 | - | GH13_26 |
| CAZyme | k141_160243 | k141_160243_147 | 165598 | 167382 | - | GH13_10 |
Gene ID: k141_160243_133
Type: TC
Location: 146657 - 149797 (-)
Type: TC
Location: 146657 - 149797 (-)
Gene ID: k141_160243_134
Type: TC
Location: 149808 - 151049 (-)
Type: TC
Location: 149808 - 151049 (-)
Gene ID: k141_160243_135
Type: pfam
Location: 151061 - 151402 (-)
Type: pfam
Location: 151061 - 151402 (-)
Gene ID: k141_160243_136
Type: TC
Location: 151430 - 152815 (-)
Type: TC
Location: 151430 - 152815 (-)
Gene ID: k141_160243_137
Type: TF
Location: 152978 - 153661 (+)
Type: TF
Location: 152978 - 153661 (+)
Gene ID: k141_160243_138
Type: TC
Location: 153651 - 155108 (+)
Type: TC
Location: 153651 - 155108 (+)
Gene ID: k141_160243_139
Type: TF
Location: 155076 - 155987 (-)
Type: TF
Location: 155076 - 155987 (-)
Gene ID: k141_160243_140
Type: TC
Location: 156105 - 157514 (+)
Type: TC
Location: 156105 - 157514 (+)
Gene ID: k141_160243_141
Type: pfam
Location: 157551 - 158546 (-)
Type: pfam
Location: 157551 - 158546 (-)
Gene ID: k141_160243_142
Type: TC
Location: 158570 - 159556 (-)
Type: TC
Location: 158570 - 159556 (-)
Gene ID: k141_160243_143
Type: pfam
Location: 159553 - 160275 (-)
Type: pfam
Location: 159553 - 160275 (-)
Gene ID: k141_160243_144
Type: TF
Location: 160491 - 161039 (+)
Type: TF
Location: 160491 - 161039 (+)
Gene ID: k141_160243_145
Type: CAZyme
Location: 161042 - 163117 (-)
Type: CAZyme
Location: 161042 - 163117 (-)
Gene ID: k141_160243_146
Type: CAZyme
Location: 163133 - 165601 (-)
Type: CAZyme
Location: 163133 - 165601 (-)
Gene ID: k141_160243_147
Type: CAZyme
Location: 165598 - 167382 (-)
Type: CAZyme
Location: 165598 - 167382 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_160243_141 | vegetarian > omnivore | 1.24148 | 0.03862 |
| k141_160243_141 | vegetarian > vegan | 2.04307 | 0.02247 |
| k141_160243_145 | vegetarian > omnivore | 1.66994 | 0.03862 |
| k141_160243_145 | vegetarian > vegan | 1.49367 | 0.02247 |