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Cluster: AG390_93_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28588 k141_28588_93 104645 105274 - 5.A.3.3.2
TC k141_28588 k141_28588_94 105271 107649 - 5.A.3.3.2
CAZyme k141_28588 k141_28588_95 107738 110065 - GT51
peptidase k141_28588 k141_28588_96 110067 115019 - I39.008
TC k141_28588 k141_28588_97 115294 116838 + 4.A.1.1.13
CAZyme k141_28588 k141_28588_98 116851 118218 + GH4
Gene ID: k141_28588_93
Type: TC
Location: 104645 - 105274 (-)
Gene ID: k141_28588_94
Type: TC
Location: 105271 - 107649 (-)
Gene ID: k141_28588_95
Type: CAZyme
Location: 107738 - 110065 (-)
Gene ID: k141_28588_96
Type: peptidase
Location: 110067 - 115019 (-)
Gene ID: k141_28588_97
Type: TC
Location: 115294 - 116838 (+)
Gene ID: k141_28588_98
Type: CAZyme
Location: 116851 - 118218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_28588_93 vegetarian > omnivore 1.69220 0.03862
k141_28588_94 vegetarian > omnivore 2.01629 0.02443
k141_28588_97 vegetarian > omnivore 2.37494 0.03862
k141_28588_97 vegetarian > vegan 1.18153 0.02247

🧭 Explore Read Mapping of CGC

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