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Cluster: AG390_93_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_318097 k141_318097_70 72735 73028 - 3.A.1.27.3
TC k141_318097 k141_318097_71 73028 73663 - 3.A.1.27.3
TC k141_318097 k141_318097_72 73682 74230 - 3.A.1.27.3
TC k141_318097 k141_318097_73 74235 75017 - 3.A.1.27.3
TC k141_318097 k141_318097_74 75025 75837 - 3.A.1.27.3
TC k141_318097 k141_318097_75 76066 77043 + 2.A.19.5.1
STP k141_318097 k141_318097_76 77057 78043 + CBS | CBS | SIS
pfam k141_318097 k141_318097_77 78058 78624 + Hydrolase_3
TC k141_318097 k141_318097_78 78621 79196 + 1.B.42.1.2
TC k141_318097 k141_318097_79 79165 79719 + 1.B.42.1.2
TC k141_318097 k141_318097_80 79726 80451 + 1.B.42.1.2
pfam k141_318097 k141_318097_81 80499 81932 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_318097 k141_318097_82 81955 82242 + Ribosomal_S30AE
TC k141_318097 k141_318097_83 82325 82816 + 4.A.2.1.4
pfam k141_318097 k141_318097_84 82862 83716 + RapZ-like_N | PapZ_C
TC k141_318097 k141_318097_85 83713 83985 + 8.A.8.1.5
CAZyme k141_318097 k141_318097_86 84023 84748 - GT51
peptidase k141_318097 k141_318097_87 84745 85398 - C56.975
STP k141_318097 k141_318097_88 85630 87963 - HATPase_c | HisKA | PAS | Response_reg
TC k141_318097 k141_318097_89 88099 89181 - 1.B.42.1.2
TC k141_318097 k141_318097_90 89181 90281 - 1.B.42.1.2
Gene ID: k141_318097_70
Type: TC
Location: 72735 - 73028 (-)
Gene ID: k141_318097_71
Type: TC
Location: 73028 - 73663 (-)
Gene ID: k141_318097_72
Type: TC
Location: 73682 - 74230 (-)
Gene ID: k141_318097_73
Type: TC
Location: 74235 - 75017 (-)
Gene ID: k141_318097_74
Type: TC
Location: 75025 - 75837 (-)
Gene ID: k141_318097_75
Type: TC
Location: 76066 - 77043 (+)
Gene ID: k141_318097_76
Type: STP
Location: 77057 - 78043 (+)
Gene ID: k141_318097_77
Type: pfam
Location: 78058 - 78624 (+)
Gene ID: k141_318097_78
Type: TC
Location: 78621 - 79196 (+)
Gene ID: k141_318097_79
Type: TC
Location: 79165 - 79719 (+)
Gene ID: k141_318097_80
Type: TC
Location: 79726 - 80451 (+)
Gene ID: k141_318097_81
Type: pfam
Location: 80499 - 81932 (+)
Gene ID: k141_318097_82
Type: pfam
Location: 81955 - 82242 (+)
Gene ID: k141_318097_83
Type: TC
Location: 82325 - 82816 (+)
Gene ID: k141_318097_84
Type: pfam
Location: 82862 - 83716 (+)
Gene ID: k141_318097_85
Type: TC
Location: 83713 - 83985 (+)
Gene ID: k141_318097_86
Type: CAZyme
Location: 84023 - 84748 (-)
Gene ID: k141_318097_87
Type: peptidase
Location: 84745 - 85398 (-)
Gene ID: k141_318097_88
Type: STP
Location: 85630 - 87963 (-)
Gene ID: k141_318097_89
Type: TC
Location: 88099 - 89181 (-)
Gene ID: k141_318097_90
Type: TC
Location: 89181 - 90281 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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