dbCAN Logo

Cluster: AG390_93_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_14206 k141_14206_28 28418 29401 + GT2
pfam k141_14206 k141_14206_29 29398 31380 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_14206 k141_14206_30 31377 32279 + Polysacc_deac_1
CAZyme k141_14206 k141_14206_31 32276 33931 + GT83
TC k141_14206 k141_14206_32 33928 34266 + 2.A.7.22.2
TC k141_14206 k141_14206_33 34263 34667 + 2.A.7.22.2
pfam k141_14206 k141_14206_34 34618 35217 - ACPS
TC k141_14206 k141_14206_35 35322 36371 - 2.A.86.1.2
TC k141_14206 k141_14206_36 36516 37733 + 2.A.1.46.7
pfam k141_14206 k141_14206_37 37738 38295 - DcrB
TC k141_14206 k141_14206_38 38368 39033 - 2.A.88.8.6
pfam k141_14206 k141_14206_39 39201 39443 + TusA
TC k141_14206 k141_14206_40 39448 40734 - 2.A.56.1.5
pfam k141_14206 k141_14206_41 40745 41254 - DctQ
TC k141_14206 k141_14206_42 41266 42237 - 2.A.56.1.5
TC k141_14206 k141_14206_43 42434 44608 - 3.A.3.6.2
Gene ID: k141_14206_28
Type: CAZyme
Location: 28418 - 29401 (+)
Gene ID: k141_14206_29
Type: pfam
Location: 29398 - 31380 (+)
Gene ID: k141_14206_30
Type: pfam
Location: 31377 - 32279 (+)
Gene ID: k141_14206_31
Type: CAZyme
Location: 32276 - 33931 (+)
Gene ID: k141_14206_32
Type: TC
Location: 33928 - 34266 (+)
Gene ID: k141_14206_33
Type: TC
Location: 34263 - 34667 (+)
Gene ID: k141_14206_34
Type: pfam
Location: 34618 - 35217 (-)
Gene ID: k141_14206_35
Type: TC
Location: 35322 - 36371 (-)
Gene ID: k141_14206_36
Type: TC
Location: 36516 - 37733 (+)
Gene ID: k141_14206_37
Type: pfam
Location: 37738 - 38295 (-)
Gene ID: k141_14206_38
Type: TC
Location: 38368 - 39033 (-)
Gene ID: k141_14206_39
Type: pfam
Location: 39201 - 39443 (+)
Gene ID: k141_14206_40
Type: TC
Location: 39448 - 40734 (-)
Gene ID: k141_14206_41
Type: pfam
Location: 40745 - 41254 (-)
Gene ID: k141_14206_42
Type: TC
Location: 41266 - 42237 (-)
Gene ID: k141_14206_43
Type: TC
Location: 42434 - 44608 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_14206_40 vegetarian > omnivore 1.16974 0.03862
k141_14206_42 vegetarian > omnivore 1.38448 0.03862
k141_14206_42 vegetarian > vegan 1.26318 0.02247

🧭 Explore Read Mapping of CGC

← Back to Cluster List