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Cluster: AG390_93_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_79520 k141_79520_158 164859 165467 + 3.D.1.9.2
TC k141_79520 k141_79520_159 165464 167278 + 3.D.1.9.2
TC k141_79520 k141_79520_160 167280 168203 + 3.D.1.9.2
TC k141_79520 k141_79520_161 168219 169928 + 3.D.1.9.2
TC k141_79520 k141_79520_162 169938 170480 + 3.D.1.9.2
TC k141_79520 k141_79520_163 170480 171247 + 3.D.1.9.2
pfam k141_79520 k141_79520_164 171244 171654 + HycH
peptidase k141_79520 k141_79520_165 171647 172108 + A31.003
CAZyme k141_79520 k141_79520_166 172169 173593 - GH1
TC k141_79520 k141_79520_167 173612 175063 - 4.A.1.2.3
TF k141_79520 k141_79520_168 175177 176292 + LacI
TC k141_79520 k141_79520_169 176427 176972 + 5.A.3.11.1
pfam k141_79520 k141_79520_170 176979 179195 + Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_79520 k141_79520_171 179197 180219 + 2.A.52.1.1
Gene ID: k141_79520_158
Type: TC
Location: 164859 - 165467 (+)
Gene ID: k141_79520_159
Type: TC
Location: 165464 - 167278 (+)
Gene ID: k141_79520_160
Type: TC
Location: 167280 - 168203 (+)
Gene ID: k141_79520_161
Type: TC
Location: 168219 - 169928 (+)
Gene ID: k141_79520_162
Type: TC
Location: 169938 - 170480 (+)
Gene ID: k141_79520_163
Type: TC
Location: 170480 - 171247 (+)
Gene ID: k141_79520_164
Type: pfam
Location: 171244 - 171654 (+)
Gene ID: k141_79520_165
Type: peptidase
Location: 171647 - 172108 (+)
Gene ID: k141_79520_166
Type: CAZyme
Location: 172169 - 173593 (-)
Gene ID: k141_79520_167
Type: TC
Location: 173612 - 175063 (-)
Gene ID: k141_79520_168
Type: TF
Location: 175177 - 176292 (+)
Gene ID: k141_79520_169
Type: TC
Location: 176427 - 176972 (+)
Gene ID: k141_79520_170
Type: pfam
Location: 176979 - 179195 (+)
Gene ID: k141_79520_171
Type: TC
Location: 179197 - 180219 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_79520_165 vegetarian > vegan 1.72968 0.01359
k141_79520_168 vegetarian > omnivore 1.22422 0.03862
k141_79520_171 vegetarian > omnivore 1.13842 0.03862

🧭 Explore Read Mapping of CGC

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