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Cluster: AG377_71_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29186 k141_29186_12 10967 12775 + GH36
pfam k141_29186 k141_29186_13 12862 13617 + RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_25
CAZyme k141_29186 k141_29186_14 13599 14735 - GT28
TC k141_29186 k141_29186_15 14739 16022 - 2.A.103.1.3
NULL(UNKNOWN) k141_29186 k141_29186_16 16438 17250 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_29186 k141_29186_17 17252 18976 + SBP_bac_1
TC k141_29186 k141_29186_18 18976 19878 + 3.A.1.1.41
TC k141_29186 k141_29186_19 19897 20727 + 3.A.1.1.20
TC k141_29186 k141_29186_20 20918 22402 + 2.A.21.2.3
Gene ID: k141_29186_12
Type: CAZyme
Location: 10967 - 12775 (+)
Gene ID: k141_29186_13
Type: pfam
Location: 12862 - 13617 (+)
Gene ID: k141_29186_14
Type: CAZyme
Location: 13599 - 14735 (-)
Gene ID: k141_29186_15
Type: TC
Location: 14739 - 16022 (-)
Gene ID: k141_29186_16
Type:
Location: 16438 - 17250 (+)
Gene ID: k141_29186_17
Type: STP
Location: 17252 - 18976 (+)
Gene ID: k141_29186_18
Type: TC
Location: 18976 - 19878 (+)
Gene ID: k141_29186_19
Type: TC
Location: 19897 - 20727 (+)
Gene ID: k141_29186_20
Type: TC
Location: 20918 - 22402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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