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Cluster: AG377_71_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_351493 k141_351493_35 45530 48991 + CBM9 | GH39
CAZyme k141_351493 k141_351493_36 49156 50370 + CE7
TF k141_351493 k141_351493_37 50255 51250 - HTH_AraC | HTH_AraC
CAZyme k141_351493 k141_351493_38 51363 52868 + GH27
pfam k141_351493 k141_351493_39 52892 54202 - Mur_ligase_C | Mur_ligase_M
pfam k141_351493 k141_351493_40 54413 55513 + MMR_HSR1 | FeoB_N | YchF-GTPase_C
TC k141_351493 k141_351493_41 55549 57120 + 2.A.66.4.1
TC k141_351493 k141_351493_42 57225 58844 + 2.A.14.1.3
Gene ID: k141_351493_35
Type: CAZyme
Location: 45530 - 48991 (+)
Gene ID: k141_351493_36
Type: CAZyme
Location: 49156 - 50370 (+)
Gene ID: k141_351493_37
Type: TF
Location: 50255 - 51250 (-)
Gene ID: k141_351493_38
Type: CAZyme
Location: 51363 - 52868 (+)
Gene ID: k141_351493_39
Type: pfam
Location: 52892 - 54202 (-)
Gene ID: k141_351493_40
Type: pfam
Location: 54413 - 55513 (+)
Gene ID: k141_351493_41
Type: TC
Location: 55549 - 57120 (+)
Gene ID: k141_351493_42
Type: TC
Location: 57225 - 58844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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