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Cluster: AG377_71_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_125624 k141_125624_20 24277 25518 + CE7
CAZyme k141_125624 k141_125624_21 25529 26830 + CE7
CAZyme k141_125624 k141_125624_22 26855 28234 + GH57
TC k141_125624 k141_125624_23 28336 29631 - 1.A.23.4.5
pfam k141_125624 k141_125624_24 29802 30875 + tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
pfam k141_125624 k141_125624_25 30872 31933 + Radical_SAM
CAZyme k141_125624 k141_125624_26 31930 33693 + GH36
peptidase k141_125624 k141_125624_27 33719 35896 - U32.UPW
CAZyme k141_125624 k141_125624_28 36001 37122 - GH179
Gene ID: k141_125624_20
Type: CAZyme
Location: 24277 - 25518 (+)
Gene ID: k141_125624_21
Type: CAZyme
Location: 25529 - 26830 (+)
Gene ID: k141_125624_22
Type: CAZyme
Location: 26855 - 28234 (+)
Gene ID: k141_125624_23
Type: TC
Location: 28336 - 29631 (-)
Gene ID: k141_125624_24
Type: pfam
Location: 29802 - 30875 (+)
Gene ID: k141_125624_25
Type: pfam
Location: 30872 - 31933 (+)
Gene ID: k141_125624_26
Type: CAZyme
Location: 31930 - 33693 (+)
Gene ID: k141_125624_27
Type: peptidase
Location: 33719 - 35896 (-)
Gene ID: k141_125624_28
Type: CAZyme
Location: 36001 - 37122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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