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Cluster: AG377_122_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_179826 k141_179826_20 20893 21798 - GH26
CAZyme k141_179826 k141_179826_21 21917 23008 - CBM35inCE17 | CE17
CAZyme k141_179826 k141_179826_22 23005 24075 - CE2
TC k141_179826 k141_179826_23 24141 24794 - 9.B.28.1.8
STP k141_179826 k141_179826_24 24876 26258 - SBP_bac_1
pfam k141_179826 k141_179826_25 26298 28109 - CBM65_1 | CBM65_1 | CBM65_1
TC k141_179826 k141_179826_26 28189 29187 - 3.A.1.1.11
TC k141_179826 k141_179826_27 29205 30116 - 3.A.1.1.45
Gene ID: k141_179826_20
Type: CAZyme
Location: 20893 - 21798 (-)
Gene ID: k141_179826_21
Type: CAZyme
Location: 21917 - 23008 (-)
Gene ID: k141_179826_22
Type: CAZyme
Location: 23005 - 24075 (-)
Gene ID: k141_179826_23
Type: TC
Location: 24141 - 24794 (-)
Gene ID: k141_179826_24
Type: STP
Location: 24876 - 26258 (-)
Gene ID: k141_179826_25
Type: pfam
Location: 26298 - 28109 (-)
Gene ID: k141_179826_26
Type: TC
Location: 28189 - 29187 (-)
Gene ID: k141_179826_27
Type: TC
Location: 29205 - 30116 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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