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Cluster: AG377_122_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_204917 k141_204917_31 34921 36189 - GT4
CAZyme k141_204917 k141_204917_32 36802 37830 - GT4
CAZyme k141_204917 k141_204917_33 38417 40444 + GH20
TF k141_204917 k141_204917_34 40564 41583 - LacI
pfam k141_204917 k141_204917_35 41747 43117 - MatE | MatE
CAZyme k141_204917 k141_204917_36 43315 45318 + GH120
pfam k141_204917 k141_204917_37 45618 46814 + AAA_14 | DUF4143
TC k141_204917 k141_204917_38 47036 48184 + 9.B.34.1.2
Gene ID: k141_204917_31
Type: CAZyme
Location: 34921 - 36189 (-)
Gene ID: k141_204917_32
Type: CAZyme
Location: 36802 - 37830 (-)
Gene ID: k141_204917_33
Type: CAZyme
Location: 38417 - 40444 (+)
Gene ID: k141_204917_34
Type: TF
Location: 40564 - 41583 (-)
Gene ID: k141_204917_35
Type: pfam
Location: 41747 - 43117 (-)
Gene ID: k141_204917_36
Type: CAZyme
Location: 43315 - 45318 (+)
Gene ID: k141_204917_37
Type: pfam
Location: 45618 - 46814 (+)
Gene ID: k141_204917_38
Type: TC
Location: 47036 - 48184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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