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Cluster: AG377_122_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_165056 k141_165056_43 43622 45559 + GH127
STP k141_165056 k141_165056_44 45636 46973 + SBP_bac_1
TC k141_165056 k141_165056_45 47106 47999 + 3.A.1.1.11
TC k141_165056 k141_165056_46 47999 48856 + 3.A.1.1.11
pfam k141_165056 k141_165056_47 49518 50183 + DUF624
STP k141_165056 k141_165056_48 50554 51486 + GGDEF
TC k141_165056 k141_165056_49 51601 52476 - 3.A.1.5.20
TC k141_165056 k141_165056_50 52469 53467 - 3.A.1.5.20
TC k141_165056 k141_165056_51 53503 54387 - 3.A.1.5.19
TC k141_165056 k141_165056_52 54380 55390 - 3.A.1.5.25
TC k141_165056 k141_165056_53 55552 57084 - 3.A.1.5.28
TC k141_165056 k141_165056_54 57256 57798 + 2.A.51.1.6
TC k141_165056 k141_165056_55 57795 58394 + 2.A.51.1.6
Gene ID: k141_165056_43
Type: CAZyme
Location: 43622 - 45559 (+)
Gene ID: k141_165056_44
Type: STP
Location: 45636 - 46973 (+)
Gene ID: k141_165056_45
Type: TC
Location: 47106 - 47999 (+)
Gene ID: k141_165056_46
Type: TC
Location: 47999 - 48856 (+)
Gene ID: k141_165056_47
Type: pfam
Location: 49518 - 50183 (+)
Gene ID: k141_165056_48
Type: STP
Location: 50554 - 51486 (+)
Gene ID: k141_165056_49
Type: TC
Location: 51601 - 52476 (-)
Gene ID: k141_165056_50
Type: TC
Location: 52469 - 53467 (-)
Gene ID: k141_165056_51
Type: TC
Location: 53503 - 54387 (-)
Gene ID: k141_165056_52
Type: TC
Location: 54380 - 55390 (-)
Gene ID: k141_165056_53
Type: TC
Location: 55552 - 57084 (-)
Gene ID: k141_165056_54
Type: TC
Location: 57256 - 57798 (+)
Gene ID: k141_165056_55
Type: TC
Location: 57795 - 58394 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_165056_53 vegetarian > vegan 1.43557 0.01287

🧭 Explore Read Mapping of CGC

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