dbCAN Logo

Cluster: AG377_122_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_165056 k141_165056_21 19643 20737 - 3.A.1.1.46
TF k141_165056 k141_165056_22 21060 21851 + HTH_AraC | HTH_AraC
CAZyme k141_165056 k141_165056_23 21838 22962 - GH105
CAZyme k141_165056 k141_165056_24 22973 24508 - GH28
NULL(UNKNOWN) k141_165056 k141_165056_25 24510 25148 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_165056 k141_165056_26 25175 25711 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_165056 k141_165056_27 25708 26781 - 3.A.1.1.22
Gene ID: k141_165056_21
Type: TC
Location: 19643 - 20737 (-)
Gene ID: k141_165056_22
Type: TF
Location: 21060 - 21851 (+)
Gene ID: k141_165056_23
Type: CAZyme
Location: 21838 - 22962 (-)
Gene ID: k141_165056_24
Type: CAZyme
Location: 22973 - 24508 (-)
Gene ID: k141_165056_25
Type:
Location: 24510 - 25148 (-)
Gene ID: k141_165056_26
Type:
Location: 25175 - 25711 (-)
Gene ID: k141_165056_27
Type: TC
Location: 25708 - 26781 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List