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Cluster: AG377_122_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_257531 k141_257531_26 19219 21453 + GH3
TF k141_257531 k141_257531_27 21521 22312 - HTH_AraC | HTH_AraC
TC k141_257531 k141_257531_28 22309 23166 - 3.A.1.1.2
TC k141_257531 k141_257531_29 23180 24106 - 3.A.1.1.28
STP k141_257531 k141_257531_30 24195 25466 - SBP_bac_1
TC k141_257531 k141_257531_31 25613 27301 - 8.A.59.2.1
NULL(UNKNOWN) k141_257531 k141_257531_32 28115 36073 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_257531 k141_257531_33 36076 37215 + Peripla_BP_2
TC k141_257531 k141_257531_34 37219 38301 + 3.A.1.13.2
TC k141_257531 k141_257531_35 38307 39404 + 3.A.1.13.2
Gene ID: k141_257531_26
Type: CAZyme
Location: 19219 - 21453 (+)
Gene ID: k141_257531_27
Type: TF
Location: 21521 - 22312 (-)
Gene ID: k141_257531_28
Type: TC
Location: 22309 - 23166 (-)
Gene ID: k141_257531_29
Type: TC
Location: 23180 - 24106 (-)
Gene ID: k141_257531_30
Type: STP
Location: 24195 - 25466 (-)
Gene ID: k141_257531_31
Type: TC
Location: 25613 - 27301 (-)
Gene ID: k141_257531_32
Type:
Location: 28115 - 36073 (+)
Gene ID: k141_257531_33
Type: STP
Location: 36076 - 37215 (+)
Gene ID: k141_257531_34
Type: TC
Location: 37219 - 38301 (+)
Gene ID: k141_257531_35
Type: TC
Location: 38307 - 39404 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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