dbCAN Logo

Cluster: AG377_122_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80810 k141_80810_42 51888 53300 - 2.A.66.1.33
CAZyme k141_80810 k141_80810_43 53431 55485 - GH120
CAZyme k141_80810 k141_80810_44 55505 57874 - GH3
pfam k141_80810 k141_80810_45 57966 58979 - BPD_transp_2
NULL(UNKNOWN) k141_80810 k141_80810_46 59041 60234 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_80810 k141_80810_47 60298 61299 - 3.A.1.2.26
TC k141_80810 k141_80810_48 61315 62820 - 3.A.1.2.13
TF k141_80810 k141_80810_49 63266 64294 - LacI
CAZyme k141_80810 k141_80810_50 64633 67044 + GH2
TF k141_80810 k141_80810_51 67154 68194 - LacI
pfam k141_80810 k141_80810_52 68662 69660 + CBM26 | CBM26 | CBM26
TC k141_80810 k141_80810_53 69730 70941 + 3.A.1.1.16
TC k141_80810 k141_80810_54 70942 71835 + 3.A.1.1.44
TC k141_80810 k141_80810_55 71832 72677 + 3.A.1.1.6
CAZyme k141_80810 k141_80810_56 72674 74389 + CBM34 | GH13_20
TF k141_80810 k141_80810_57 74456 75463 + LacI
TC k141_80810 k141_80810_58 75850 76335 + 4.A.1.2.6
TC k141_80810 k141_80810_59 76348 77961 + 8.A.7.1.1
STP k141_80810 k141_80810_60 78014 78271 + PTS-HPr
TC k141_80810 k141_80810_61 78358 79857 + 4.A.1.1.7
TC k141_80810 k141_80810_62 79996 81834 - 2.A.16.2.2
STP k141_80810 k141_80810_63 82192 82974 + SBP_bac_3
TC k141_80810 k141_80810_64 83053 83742 + 3.A.1.3.12
TC k141_80810 k141_80810_65 83747 84505 + 3.A.1.3.6
Gene ID: k141_80810_42
Type: TC
Location: 51888 - 53300 (-)
Gene ID: k141_80810_43
Type: CAZyme
Location: 53431 - 55485 (-)
Gene ID: k141_80810_44
Type: CAZyme
Location: 55505 - 57874 (-)
Gene ID: k141_80810_45
Type: pfam
Location: 57966 - 58979 (-)
Gene ID: k141_80810_46
Type:
Location: 59041 - 60234 (-)
Gene ID: k141_80810_47
Type: TC
Location: 60298 - 61299 (-)
Gene ID: k141_80810_48
Type: TC
Location: 61315 - 62820 (-)
Gene ID: k141_80810_49
Type: TF
Location: 63266 - 64294 (-)
Gene ID: k141_80810_50
Type: CAZyme
Location: 64633 - 67044 (+)
Gene ID: k141_80810_51
Type: TF
Location: 67154 - 68194 (-)
Gene ID: k141_80810_52
Type: pfam
Location: 68662 - 69660 (+)
Gene ID: k141_80810_53
Type: TC
Location: 69730 - 70941 (+)
Gene ID: k141_80810_54
Type: TC
Location: 70942 - 71835 (+)
Gene ID: k141_80810_55
Type: TC
Location: 71832 - 72677 (+)
Gene ID: k141_80810_56
Type: CAZyme
Location: 72674 - 74389 (+)
Gene ID: k141_80810_57
Type: TF
Location: 74456 - 75463 (+)
Gene ID: k141_80810_58
Type: TC
Location: 75850 - 76335 (+)
Gene ID: k141_80810_59
Type: TC
Location: 76348 - 77961 (+)
Gene ID: k141_80810_60
Type: STP
Location: 78014 - 78271 (+)
Gene ID: k141_80810_61
Type: TC
Location: 78358 - 79857 (+)
Gene ID: k141_80810_62
Type: TC
Location: 79996 - 81834 (-)
Gene ID: k141_80810_63
Type: STP
Location: 82192 - 82974 (+)
Gene ID: k141_80810_64
Type: TC
Location: 83053 - 83742 (+)
Gene ID: k141_80810_65
Type: TC
Location: 83747 - 84505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List