Cluster: AG373_bin.2_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG373_bin.2
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_233235 | k141_233235_80 | 94786 | 95322 | - | 4.A.1.2.6 |
| CAZyme | k141_233235 | k141_233235_81 | 95577 | 97025 | - | GH1 |
| TF | k141_233235 | k141_233235_82 | 97198 | 98175 | - | HTH_AraC |
| NULL(UNKNOWN) | k141_233235 | k141_233235_83 | 98423 | 98581 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_233235 | k141_233235_84 | 98720 | 101002 | + | GH106 |
| TF | k141_233235 | k141_233235_85 | 101045 | 101899 | + | HTH_6 |
| STP | k141_233235 | k141_233235_86 | 102234 | 102914 | - | Pribosyltran |
| TC | k141_233235 | k141_233235_87 | 103352 | 106120 | + | 3.A.3.4.1 |
Gene ID: k141_233235_80
Type: TC
Location: 94786 - 95322 (-)
Type: TC
Location: 94786 - 95322 (-)
Gene ID: k141_233235_81
Type: CAZyme
Location: 95577 - 97025 (-)
Type: CAZyme
Location: 95577 - 97025 (-)
Gene ID: k141_233235_82
Type: TF
Location: 97198 - 98175 (-)
Type: TF
Location: 97198 - 98175 (-)
Gene ID: k141_233235_83
Type:
Location: 98423 - 98581 (+)
Type:
Location: 98423 - 98581 (+)
Gene ID: k141_233235_84
Type: CAZyme
Location: 98720 - 101002 (+)
Type: CAZyme
Location: 98720 - 101002 (+)
Gene ID: k141_233235_85
Type: TF
Location: 101045 - 101899 (+)
Type: TF
Location: 101045 - 101899 (+)
Gene ID: k141_233235_86
Type: STP
Location: 102234 - 102914 (-)
Type: STP
Location: 102234 - 102914 (-)
Gene ID: k141_233235_87
Type: TC
Location: 103352 - 106120 (+)
Type: TC
Location: 103352 - 106120 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.