Cluster: AG373_bin.2_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG373_bin.2
- CGC Family ID: CGCFAM_00154
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_233235 | k141_233235_6 | 5681 | 8449 | - | 3.A.3.4.1 |
| STP | k141_233235 | k141_233235_7 | 8887 | 9567 | + | Pribosyltran |
| TF | k141_233235 | k141_233235_8 | 9902 | 10756 | - | HTH_6 |
| CAZyme | k141_233235 | k141_233235_9 | 10799 | 13081 | - | GH106 |
| NULL(UNKNOWN) | k141_233235 | k141_233235_10 | 13220 | 13378 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_233235 | k141_233235_11 | 13626 | 14603 | + | HTH_AraC |
| CAZyme | k141_233235 | k141_233235_12 | 14776 | 16224 | + | GH1 |
| TC | k141_233235 | k141_233235_13 | 16479 | 17015 | + | 4.A.1.2.6 |
Gene ID: k141_233235_6
Type: TC
Location: 5681 - 8449 (-)
Type: TC
Location: 5681 - 8449 (-)
Gene ID: k141_233235_7
Type: STP
Location: 8887 - 9567 (+)
Type: STP
Location: 8887 - 9567 (+)
Gene ID: k141_233235_8
Type: TF
Location: 9902 - 10756 (-)
Type: TF
Location: 9902 - 10756 (-)
Gene ID: k141_233235_9
Type: CAZyme
Location: 10799 - 13081 (-)
Type: CAZyme
Location: 10799 - 13081 (-)
Gene ID: k141_233235_10
Type:
Location: 13220 - 13378 (-)
Type:
Location: 13220 - 13378 (-)
Gene ID: k141_233235_11
Type: TF
Location: 13626 - 14603 (+)
Type: TF
Location: 13626 - 14603 (+)
Gene ID: k141_233235_12
Type: CAZyme
Location: 14776 - 16224 (+)
Type: CAZyme
Location: 14776 - 16224 (+)
Gene ID: k141_233235_13
Type: TC
Location: 16479 - 17015 (+)
Type: TC
Location: 16479 - 17015 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.