Cluster: AG373_bin.2_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: AG373_bin.2
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_73202 | k141_73202_11 | 15596 | 16972 | - | GH13_20 |
| TC | k141_73202 | k141_73202_12 | 17439 | 18635 | - | 2.A.1.2.18 |
| NULL(UNKNOWN) | k141_73202 | k141_73202_13 | 18810 | 19562 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_73202 | k141_73202_14 | 19728 | 21101 | - | GH4 |
| TF | k141_73202 | k141_73202_15 | 21276 | 22028 | + | HTH_6 |
| TC | k141_73202 | k141_73202_16 | 22091 | 23755 | - | 4.A.1.1.3 |
| TC | k141_73202 | k141_73202_17 | 24070 | 26430 | - | 9.A.8.1.6 |
| TC | k141_73202 | k141_73202_18 | 27128 | 28591 | - | 2.A.3.2.3 |
Gene ID: k141_73202_11
Type: CAZyme
Location: 15596 - 16972 (-)
Type: CAZyme
Location: 15596 - 16972 (-)
Gene ID: k141_73202_12
Type: TC
Location: 17439 - 18635 (-)
Type: TC
Location: 17439 - 18635 (-)
Gene ID: k141_73202_13
Type:
Location: 18810 - 19562 (-)
Type:
Location: 18810 - 19562 (-)
Gene ID: k141_73202_14
Type: CAZyme
Location: 19728 - 21101 (-)
Type: CAZyme
Location: 19728 - 21101 (-)
Gene ID: k141_73202_15
Type: TF
Location: 21276 - 22028 (+)
Type: TF
Location: 21276 - 22028 (+)
Gene ID: k141_73202_16
Type: TC
Location: 22091 - 23755 (-)
Type: TC
Location: 22091 - 23755 (-)
Gene ID: k141_73202_17
Type: TC
Location: 24070 - 26430 (-)
Type: TC
Location: 24070 - 26430 (-)
Gene ID: k141_73202_18
Type: TC
Location: 27128 - 28591 (-)
Type: TC
Location: 27128 - 28591 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_73202_13 | vegan > omnivore | 2.13753 | 0.03254 |
| k141_73202_14 | vegan > omnivore | 1.88560 | 0.03254 |
| k141_73202_16 | vegan > omnivore | 1.25839 | 0.03254 |
| k141_73202_18 | vegan > omnivore | 1.06153 | 0.03254 |