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Cluster: AG370_112_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_148014 k141_148014_117 122143 122517 + 3.A.1.111.2
pfam k141_148014 k141_148014_118 122565 123290 - SIMPL
pfam k141_148014 k141_148014_119 123342 124289 - 2-Hacid_dh | 2-Hacid_dh_C
TC k141_148014 k141_148014_120 124455 127112 + 3.A.12.1.1
pfam k141_148014 k141_148014_121 127109 128401 + UPF0004 | Radical_SAM | TRAM_2
TC k141_148014 k141_148014_122 128398 128943 + 4.F.1.1.8
pfam k141_148014 k141_148014_123 128940 130187 + MoCF_biosynth | CinA | CinA_KH
STP k141_148014 k141_148014_124 130300 131373 + ATPase_2
CAZyme k141_148014 k141_148014_125 131488 132654 + GT4
Gene ID: k141_148014_117
Type: TC
Location: 122143 - 122517 (+)
Gene ID: k141_148014_118
Type: pfam
Location: 122565 - 123290 (-)
Gene ID: k141_148014_119
Type: pfam
Location: 123342 - 124289 (-)
Gene ID: k141_148014_120
Type: TC
Location: 124455 - 127112 (+)
Gene ID: k141_148014_121
Type: pfam
Location: 127109 - 128401 (+)
Gene ID: k141_148014_122
Type: TC
Location: 128398 - 128943 (+)
Gene ID: k141_148014_123
Type: pfam
Location: 128940 - 130187 (+)
Gene ID: k141_148014_124
Type: STP
Location: 130300 - 131373 (+)
Gene ID: k141_148014_125
Type: CAZyme
Location: 131488 - 132654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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