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Cluster: AG361_86_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_244300 k141_244300_10 11284 12570 + 3.A.1.1.16
TC k141_244300 k141_244300_11 12635 13567 + 3.A.1.1.20
TC k141_244300 k141_244300_12 13569 14441 + 3.A.1.1.18
CAZyme k141_244300 k141_244300_13 14444 16063 + GH66
TF k141_244300 k141_244300_14 16066 16962 + HTH_AraC
pfam k141_244300 k141_244300_15 16964 17569 + DUF624
CAZyme k141_244300 k141_244300_16 17574 19223 + GH13_31
Gene ID: k141_244300_10
Type: TC
Location: 11284 - 12570 (+)
Gene ID: k141_244300_11
Type: TC
Location: 12635 - 13567 (+)
Gene ID: k141_244300_12
Type: TC
Location: 13569 - 14441 (+)
Gene ID: k141_244300_13
Type: CAZyme
Location: 14444 - 16063 (+)
Gene ID: k141_244300_14
Type: TF
Location: 16066 - 16962 (+)
Gene ID: k141_244300_15
Type: pfam
Location: 16964 - 17569 (+)
Gene ID: k141_244300_16
Type: CAZyme
Location: 17574 - 19223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_244300_12 vegetarian > vegan 1.06014 0.01287
k141_244300_13 vegetarian > vegan 3.88315 0.01287
k141_244300_14 vegetarian > vegan 3.18967 0.01287

🧭 Explore Read Mapping of CGC

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