Cluster: AG359_bin.34_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: AG359_bin.34
- CGC Family ID: CGCFAM_00008
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_24970 | k141_24970_19 | 20039 | 21997 | + | GT2 |
| TC | k141_24970 | k141_24970_20 | 22227 | 23018 | + | 3.A.1.103.1 |
| TC | k141_24970 | k141_24970_21 | 23042 | 23791 | + | 3.A.1.103.6 |
| CAZyme | k141_24970 | k141_24970_22 | 23850 | 24806 | + | GT2 |
| CAZyme | k141_24970 | k141_24970_23 | 24820 | 25689 | + | GT2 |
| TC | k141_24970 | k141_24970_24 | 25772 | 27160 | + | 9.B.18.1.3 |
Gene ID: k141_24970_19
Type: CAZyme
Location: 20039 - 21997 (+)
Type: CAZyme
Location: 20039 - 21997 (+)
Gene ID: k141_24970_20
Type: TC
Location: 22227 - 23018 (+)
Type: TC
Location: 22227 - 23018 (+)
Gene ID: k141_24970_21
Type: TC
Location: 23042 - 23791 (+)
Type: TC
Location: 23042 - 23791 (+)
Gene ID: k141_24970_22
Type: CAZyme
Location: 23850 - 24806 (+)
Type: CAZyme
Location: 23850 - 24806 (+)
Gene ID: k141_24970_23
Type: CAZyme
Location: 24820 - 25689 (+)
Type: CAZyme
Location: 24820 - 25689 (+)
Gene ID: k141_24970_24
Type: TC
Location: 25772 - 27160 (+)
Type: TC
Location: 25772 - 27160 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanosphaera
Species
Methanosphaera stadtmanae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.