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Cluster: AG357_bin.53_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29177 k141_29177_3 1719 2057 - 4.A.3.1.2
TF k141_29177 k141_29177_4 2272 3276 - LacI
TC k141_29177 k141_29177_5 3634 5409 + 4.A.3.1.1
CAZyme k141_29177 k141_29177_6 5476 6915 + GH1
TF k141_29177 k141_29177_7 7177 8214 - LacI
CAZyme k141_29177 k141_29177_8 8556 9998 + GH1
TC k141_29177 k141_29177_9 10175 11935 + 4.A.3.1.1
TF k141_29177 k141_29177_10 12270 13280 - LacI
TC k141_29177 k141_29177_11 13556 15313 + 4.A.3.1.1
CAZyme k141_29177 k141_29177_12 15389 16810 + GH1
Gene ID: k141_29177_3
Type: TC
Location: 1719 - 2057 (-)
Gene ID: k141_29177_4
Type: TF
Location: 2272 - 3276 (-)
Gene ID: k141_29177_5
Type: TC
Location: 3634 - 5409 (+)
Gene ID: k141_29177_6
Type: CAZyme
Location: 5476 - 6915 (+)
Gene ID: k141_29177_7
Type: TF
Location: 7177 - 8214 (-)
Gene ID: k141_29177_8
Type: CAZyme
Location: 8556 - 9998 (+)
Gene ID: k141_29177_9
Type: TC
Location: 10175 - 11935 (+)
Gene ID: k141_29177_10
Type: TF
Location: 12270 - 13280 (-)
Gene ID: k141_29177_11
Type: TC
Location: 13556 - 15313 (+)
Gene ID: k141_29177_12
Type: CAZyme
Location: 15389 - 16810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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